Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03917 ATGTTTGACAAAGTAAACCAGTCCCTTTCATCCCAGCTGCGTTGCATGCCCATTTATGACTTAAACAAACACCAACTCTTCCTATGGAAATACCAAATCATCCCTCATATGCATGGTCTATTCAATTACTGGGAAGGCCAACAACAATTAACCGCTTCAACTCTTTTGAAACTTTCAGCAAACAAAACCAATAACATAAGACAAACAAGGACAAAACTTGCAGTTATCAATGAACAGAAAAGGTACAACAACAGATTTGTTTTCAGAATCCTTGTTTCCTCTAATTTCATGGCTTTGAATATGATGCTTCAATCATGGCTTCTTTTGAGCATTGTTTTAGTTTTACACAGTTTTTCAATACCAACCTGTCATTGCCAGACCAGTTCTCCCCAGAACATTGAAACTTTCTATCCTAATGAAACTTTAGCCCCAAGAACACAACCACCTGAGCCACCACCAAAGCCACAACCATCACCACCAACACAAGGGCACGCCCCAGGACCAGTGGCAGCATCCAAAAGTTCTTCATCAAATGGTAAGGTAGCAAAGGCTGTGGCTGCAACTGCAGCAAGCACTATAGTTGTTTGTGGTTTAGTCTTCATTTTAGTTCAAAGGTGCTTAAGGGCAAGAAGGAGAAAGGAGATAACTAACACTGCTTCTTCTGGAGATAGGCGTGTTGTGCCTCAGAGTAATGTGTTTGAGAGAATTGATGGAAATGTCAGGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAACTTGAAGGGAAAAACTCCAACAAGGATCTTCAAAAGGAGGTCTTGCCTAGTCCCAAAAACAAAGAAGTAGTAGAAGATGAGGATGATCATGAAGGAAATCAAGTGAAAAAATCTAAGTCAATCCAAGAAATTCCTTTGCTTAGAGGGAAATCTTCAACCTCCCACATAAATATATTTCCAGAAGAGGATGAGCCATATAGAATTGCAAGAATTCCCCCTCCTGCTCCTCCTAGAATTCCTACATCAGATGGGGTTGTTATCAAGGATGTTCAAAAACCAGACTCTCCATCTCAATCATCCACTCCACCCCCTCTTCCTTCACCAACAACACCATCCTCCACTTCTTTTTCAGCAATTTCAAAAATGAATGGCCCTGCAACATCAGCTCCTCCTCCCCCAGTGCCAGAGAGAAAGAGTCCAGCAGCACCACCTCCCCCTCCCCCAATTCCAGCTAGAAAGAGTCCAGCACCACCTCCTCTTCCACCAAAGACAGGTAGTTTGAAGTCATCAACAAAATCACCACCTGGCCCAATTGAAATGCCAGTTATCTCCCACAGCAAGCAAAGTAACTCTTCAGGAAAAGGCATGCCAGAAACCAGCAATGATCCAATGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATAATGCTGATCATTCCATGGTGTGGGACAAAGTTGATCTTGGCTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTCGCCACCAACCGAAGATCCCCTAAAGGAAAGAGTCAATCAACAAGTCCAAGCAAGGATGCCTCAGCTCCATCAACAAAAAGTTTCCTTCTTGACCCCAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGCAGTCTCACAAGGTGAAATTCTTGATGCACTCATTGATGGTAAAGGCCTAAATGCAGATACCCTTGAAAAGCTTTCTAGAGTTTCCCCAACAGAAGAAGAACAATCTCTTATCCTTGAATACAAAGGAGACCCAGCAAGACTTGCTGCAGCTGAATCCTTCCTGTATCACATCCTTAAAGCTGTTCCATCAGCATTTAAGCGCTTGAATGCCATGCTATTCAGGTTGAACTATGACTCTGAGATTCTAGAAATCAAGGAATCTCTGCAGACCATTGAACTGGGGTGTAAGGAGCTTAAAAGCCAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATCGAATGAATGCAGGAACAGCCAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTAAGGAAACTCTCTGATGTCAAAAGCACCAATGGAAAAACCACATTACTTCACTTTGTGGTAGAAGAAGTAGTCCGTTCTGAAGGAAAACGTGTTGTTGTTAACCGTAATGGCAGCCTGAGCCGTAGTAGCAGTAGGAACAGCAGCATCAGTGCAAACTCTGAGAACAGTGCTGCTTCAGATGAACAGAAAGAAAGGGAATATATGATGCTAGGATTACCAATTGTAGGAGGGATCAGTTCTGAGCTCTCCAACGTTAAGAAAGTAGCACATATAGATTATAACAGTTTAGTTGGTTCAATCTCAGCCCTCTCAACCCGGTTAGTTGAAATTCAAGAACTTGTTTCCCGGTGTGGAAATGTTGAAGGAGGATATTTTGTAAAAGAAATGCACCATTTTCTTAGAAATGCTGAGGAAGAATTGAAATTGGTGAGGGACAAACAAACAAGTGTATGGCAGCTTCTCAATAAAACAGCACAATATTACCAAGGAGGAGCTTCAAAAGACTCTGCAGAAAAAAACCTTCAACTATTTGCTATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCTTGCATTGAGATTGCACGTGACATGCAGAAGAGGAAGACCCCCAAGACAATTTTTAGCTAA 2685 0.4194 MFDKVNQSLSSQLRCMPIYDLNKHQLFLWKYQIIPHMHGLFNYWEGQQQLTASTLLKLSANKTNNIRQTRTKLAVINEQKRYNNRFVFRILVSSNFMALNMMLQSWLLLSIVLVLHSFSIPTCHCQTSSPQNIETFYPNETLAPRTQPPEPPPKPQPSPPTQGHAPGPVAASKSSSSNGKVAKAVAATAASTIVVCGLVFILVQRCLRARRRKEITNTASSGDRRVVPQSNVFERIDGNVRGLIVDEDGLDVIYWRKLEGKNSNKDLQKEVLPSPKNKEVVEDEDDHEGNQVKKSKSIQEIPLLRGKSSTSHINIFPEEDEPYRIARIPPPAPPRIPTSDGVVIKDVQKPDSPSQSSTPPPLPSPTTPSSTSFSAISKMNGPATSAPPPPVPERKSPAAPPPPPPIPARKSPAPPPLPPKTGSLKSSTKSPPGPIEMPVISHSKQSNSSGKGMPETSNDPMKLKPLHWDKVNTNNADHSMVWDKVDLGSFRVDQDLMEALFGYVATNRRSPKGKSQSTSPSKDASAPSTKSFLLDPRKSQNIAIVLKSLAVSQGEILDALIDGKGLNADTLEKLSRVSPTEEEQSLILEYKGDPARLAAAESFLYHILKAVPSAFKRLNAMLFRLNYDSEILEIKESLQTIELGCKELKSQGLFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTNGKTTLLHFVVEEVVRSEGKRVVVNRNGSLSRSSSRNSSISANSENSAASDEQKEREYMMLGLPIVGGISSELSNVKKVAHIDYNSLVGSISALSTRLVEIQELVSRCGNVEGGYFVKEMHHFLRNAEEELKLVRDKQTSVWQLLNKTAQYYQGGASKDSAEKNLQLFAIVKDFLGMVDQACIEIARDMQKRKTPKTIFS. 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03917 894 MobiDBLite consensus disorder prediction 345 466 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 144 164 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 383 421 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 266 300 - -
Seca11g03917 894 SUPERFAMILY Formin homology 2 domain (FH2 domain) 400 887 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 508 532 - -
Seca11g03917 894 ProSiteProfiles Formin homology-2 (FH2) domain profile. 453 894 IPR015425 -
Seca11g03917 894 MobiDBLite consensus disorder prediction 321 340 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 720 747 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 720 742 - -
Seca11g03917 894 Gene3D Formin, FH2 domain 463 891 IPR042201 -
Seca11g03917 894 MobiDBLite consensus disorder prediction 509 532 - -
Seca11g03917 894 MobiDBLite consensus disorder prediction 141 176 - -
Seca11g03917 894 PANTHER FORMIN-RELATED 124 883 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca11g03917 894 MobiDBLite consensus disorder prediction 440 455 - -
Seca11g03917 894 SMART it6_source 450 887 IPR015425 -
Seca11g03917 894 MobiDBLite consensus disorder prediction 266 294 - -
Seca11g03917 894 Pfam Formin Homology 2 Domain 460 872 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03917 Seca-Chr11 102968216 102971677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03917 106 888 FH2 protein (formin) Gene Family AT1G70140 45.037 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03917 - - gmx:100781860 961.059