Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03915 ATGCCTGGAATGACCGGTTATGAGTTGCTCAAGAAAATCAAGGAATCTTCAACTTTCAGAGAAATTCCAGTGGTGATTATGTCCTCTGAAAACATTTTGCCGCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAATTATCTGACGTGAAGCGTTTGAAAGATTACATGACAACGAAAGAGGTTAAAGGCGAAGACAGAGGAATCAACAAAAGGAAGCTACCGGACACCTCTGATGTGTCATCATCACCACCGTCCACTTCCTCATCAACGCTTTCATCATCGTCGTCGTTACCTTCTTCTCCATCACCGTCATCTTCCCTTTCATCTTCACCCTCCGTGATTGACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGATTGA 408 0.4461 MPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEVKGEDRGINKRKLPDTSDVSSSPPSTSSSTLSSSSSLPSSPSPSSSLSSSPSVIDSPIRRLKMTSTD. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03915 135 SUPERFAMILY CheY-like 1 60 IPR011006 -
Seca11g03915 135 Pfam Response regulator receiver domain 1 57 IPR001789 GO:0000160
Seca11g03915 135 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 93 IPR045279 GO:0009736
Seca11g03915 135 MobiDBLite consensus disorder prediction 67 135 - -
Seca11g03915 135 MobiDBLite consensus disorder prediction 67 81 - -
Seca11g03915 135 MobiDBLite consensus disorder prediction 82 135 - -
Seca11g03915 135 Gene3D - 1 101 - -
Seca11g03915 135 ProSiteProfiles Response regulatory domain profile. 1 65 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03915 Seca-Chr11 102883588 102885044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03915 1 90 Response Regulator Gene Family AT3G48100 70.000 4.74e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca11g03915 Response_reg 1.8e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03915 K14492 - gmx:100527828 167.548