Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03907 ATGTTTCGGAGGCAAGACTCAATGCAGAAGCCATTGAAGTTGAGACGGTTTAAAAGGGAAACCAGGTTCACATCAAAGCTTCATGCCTATAAGATAATCAACATGATTGAAGAAGCTGGAAAGCCTCTTGGTTTTGATGTACAGAAGAAAAATTACAAGGTTGATGTGAATGGTGACAATGCTACTCCAGTCTACAAGTATCTAAATCAAGCAAAGGTGGACTCTTCGGGGATAATATCAAGTGGAACTTCTCCATCATAA 261 0.3946 MFRRQDSMQKPLKLRRFKRETRFTSKLHAYKIINMIEEAGKPLGFDVQKKNYKVDVNGDNATPVYKYLNQAKVDSSGIISSGTSPS. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03907 86 Gene3D Kinase associated domain 1, KA1 1 74 - -
Seca11g03907 86 Pfam NAF domain 17 49 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03907 Seca-Chr11 102271654 102274918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03907 15 54 CBL-interacting serine-threonine protein kinases AT2G26980 67.500 4.49e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03907 - - cmax:111490964 65.0846