Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03906 ATGACTACTCATAACCCTCTCCTCTTCCTCTTCCTTTTCCTCTTGGTAGCCTTTTTCCCCTTGATACAATCCAAGTTGACCACCAATTACTACCAAAAATCCTGTCCCCAATTCTCAGACCTAATCCGAAAAACCGTGGCTGAGAAGCAACTTTCCTCACCCACCACGGCTGCTGCCACCCTCCGCCTTTTTTTCCATGACTGCATTGTTGGTGGTTGCGATGCCTCCATCCTTGTCACCACCAACTCCTTTAATAAGGCTGAGCGTGATGCCGACATTAACCTCTCCCTCCCAGGAGATGGCTTTGATGTCGTTACACGCGCCAAGACCACTCTAGAGCTTGAATGCCCCGGAGTGGTCTCATGCGCGGACATTCTAGCTACCGCGGCACGTGACCTTGTTGTGATTGTTGGTGGGCCCTTCTATAAGTTGGGCCTGGGCCGAAAAGACGGCCTGGAATCTAAAGCAATGAATACAGAAGGGCAGTTCCCAGAGCCCACCATGCCACTCTCTAAGGTAATAGAAATCTTTAAGTCTAAAGGGTTCTCCGTTCAAGAGATGGTGGCTCTTTCAGGTGCACACACTATTGGTTTCTCTCATTGCAAAGAGTTTAGCTATAGGCTCTTCAACTTCAGCAAGAACAATGAATATGACCCTAAGTTTAACCCCGAATATGCTAAGGGGTTGAGGAAGTTGTGTGAGAACTACACCAAGGACCCAACCATGTCAGCGTTCAATGACGTGATGACACCTGGCAAGTTTGACAATATGTACTACAAGAACTTGAAGAGAGGGTTAGGGTTGTTGGCAACAGACAGTGCCTTGTTTGATGACAATAGGACCAGACCCTTTGTTGATATATATGCTTCTAATGAAACCAAGTTCTTTCAGGATTTCGCTAAGGTCATGCATAAGGTTAGCATCTTGCAAATAAAGACTGGAAACAAAGGAGAGGTACGACACAGGTGTGATAATTTCAATGCGCTAGCTTAA 993 0.4653 MTTHNPLLFLFLFLLVAFFPLIQSKLTTNYYQKSCPQFSDLIRKTVAEKQLSSPTTAAATLRLFFHDCIVGGCDASILVTTNSFNKAERDADINLSLPGDGFDVVTRAKTTLELECPGVVSCADILATAARDLVVIVGGPFYKLGLGRKDGLESKAMNTEGQFPEPTMPLSKVIEIFKSKGFSVQEMVALSGAHTIGFSHCKEFSYRLFNFSKNNEYDPKFNPEYAKGLRKLCENYTKDPTMSAFNDVMTPGKFDNMYYKNLKRGLGLLATDSALFDDNRTRPFVDIYASNETKFFQDFAKVMHKVSILQIKTGNKGEVRHRCDNFNALA. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03906 330 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 FunFam Peroxidase 164 306 - -
Seca11g03906 330 PANTHER - 8 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 Pfam Peroxidase 44 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Seca11g03906 330 FunFam Peroxidase 29 176 - -
Seca11g03906 330 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca11g03906 330 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g03906 330 Gene3D Peroxidase, domain 2 164 306 - -
Seca11g03906 330 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Seca11g03906 330 Gene3D - 29 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03906 Seca-Chr11 102189175 102190167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03906 5 329 Peroxidase AT5G47000 60.366 5.15e-146 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03906 K00430 - gmx:100781063 487.263