Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03884 ATGTGTCACACTAGGTCTTCCACGTGTCAATTTTTTAAAATTTCTGGCGGTTTAAGACCGCCAGAAAACTCACCCTGTCTCTTTCTTCTCCTCCCCCACCCCTTCTCACCTTTCTTCCCCTTCTCTGCTGAGTCTGCTGAAAAGAAGTCTAAGAAACGCCTTCTTGGTAATAAAGAAGCTGTTCGCAAATACCGTGAGAAGAAGAAAGCACGTGCTGCTTCATTGGAGGATGAGGTTGTGAAATTGAGGGCTTTAAATCAACACTTGATGAGGAAGTTGCAAGGTCAGGCTGCTTTGGAGGCAGAAATTGCGAGGCTTAAGTGCTTGCTGGTTGACATCAGGGGAAAGATTGAAGGAGATATTGGCTATTTTCCTTATCAGAAATCGCCTAATTCAAACCCGCCTTTACCAAACATGCCTGGTTCTTATGTGGTGAACCCTTGCAACATGCAGTGTACGTGA 462 0.4502 MCHTRSSTCQFFKISGGLRPPENSPCLFLLLPHPFSPFFPFSAESAEKKSKKRLLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMRKLQGQAALEAEIARLKCLLVDIRGKIEGDIGYFPYQKSPNSNPPLPNMPGSYVVNPCNMQCT. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03884 153 SUPERFAMILY Leucine zipper domain 49 95 IPR046347 GO:0003700|GO:0006355
Seca11g03884 153 Gene3D - 41 113 - -
Seca11g03884 153 PANTHER CCAAT/ENHANCER BINDING PROTEIN 45 125 IPR031106 GO:0003700|GO:0006351
Seca11g03884 153 Coils Coil 58 92 - -
Seca11g03884 153 SMART brlzneu 44 112 IPR004827 GO:0003700|GO:0006355
Seca11g03884 153 CDD bZIP 51 104 - -
Seca11g03884 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 47 94 IPR004827 GO:0003700|GO:0006355
Seca11g03884 153 Pfam Basic region leucine zipper 47 102 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03884 Seca-Chr11 101262532 101262993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03884 21 152 bZIP Transcription Factor Family AT2G16770 57.971 2.02e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g03884 bZIP_2 2.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03884 K25785 - gmx:780549 163.696