Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03861 ATGGAGTTTGATACAGAAGATCATGCATATAGATTTTACAATATGTATTCTGGCTTCATTGGTTTTAGTATTAGAAAATATTGGAGAAATAAAAGCAAATTAGATGAGGAGATTGTGATATCTCGAAAATTTGTTTGTTTTAAAGAGGGCTTCAAAAATGTTAAAGGCCATGAAGGAAAAATGACCCGTAAAGATATTAGAACTGGATGTTTAGCACACATGGTCATTGGTCGACAATTGAGTGGAAAATATGTTGTTACATCATTTGTAAAAGACCATGATCATGAGCTTGCAACCCCCAAGAGTAGGCATAAATTACCATCACAAAGAAGGGTTTCTATCGCTCAAGCAGCTGAAGTTGAAATGGCGAATTGTTCTGGTATACAGCAAAAATTAATTTTTGAGTTTATGAGTCGCCAGGTTGGGGGGAGAGAGAATGTTGGCTGCACTGCTAAAGATATCAACAATCATTTGAATTCTAAGAGGATGAAAGAGATGGAAGAAGGTGAGGCATATACTCTACTTCATTATTTTAAATCAAAGCAAACAGGGAATCAATCCTTCTTCTATGAAATTCAACTTGATGTTGATAATCAAATCACAAACATATTCTGGGCAGATGCTAAAATGGTTGTGGAATATGCTTATTTTGGAGATGTCATATGTTTTGATACTACTTATCGCACTAATAAGAATTTACGGCCATTTGCTCCCTTTCTTGGATTCAATCATCATCGAGAAAGTGTGTTATTTGGTGCAACATTATTATATGATGAAACTGCTGAATCATTTGGGTGGTTGTTTAGGACTTTTCTCAAGGCAACCAAAATTAGCTGCTTAAAATCAAAATTGGAAGACATTAAAATATTAAAGAAGAAAGATACAGAAAGGAGCTTGTATTTTCGCTGA 909 0.3443 MEFDTEDHAYRFYNMYSGFIGFSIRKYWRNKSKLDEEIVISRKFVCFKEGFKNVKGHEGKMTRKDIRTGCLAHMVIGRQLSGKYVVTSFVKDHDHELATPKSRHKLPSQRRVSIAQAAEVEMANCSGIQQKLIFEFMSRQVGGRENVGCTAKDINNHLNSKRMKEMEEGEAYTLLHYFKSKQTGNQSFFYEIQLDVDNQITNIFWADAKMVVEYAYFGDVICFDTTYRTNKNLRPFAPFLGFNHHRESVLFGATLLYDETAESFGWLFRTFLKATKISCLKSKLEDIKILKKKDTERSLYFR. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03861 302 Pfam MULE transposase domain 220 276 IPR018289 -
Seca11g03861 302 PANTHER OS01G0519700 PROTEIN 1 282 - -
Seca11g03861 302 Pfam FAR1 DNA-binding domain 11 98 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03861 Seca-Chr11 100528993 100529901 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g03861 FAR1 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03861 - K17604 tpra:123914859 477.633