Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03809 ATGGATCTGGAACGTGGGATTCGCCAAAACTCTGCTAAGAAGAAAGAATCATGGATAACTGTTCTGAGTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGAGATAAGCACTTCACCACTTTACGTGTACAGGAACACATTTGCTGAAAATATTGGTCACACAGAGACCAATGAAGAGATTTATGGGGTTTTGTCTTTGGTGTTCTGGACTTTTACATTGGTGCCTTTGGTGAAGTATGTGTTTATAGTGCTCAAAGCTGATGACAATGGTGAAGGTGGCACATTTGCACTGTACTCTTTGCTGTGTCGCCATGCCAGAGTTGGCTTATTGCCCAATTGCCAATTGGCAGATGAGGAGCTTTCTGAGTACAAGAGGGACAGCTATGGAGTAGCACCAGAGAGAAGCCTTGCCTCAAGACTTAAGTCTATGTTGGAGAGGCACAAAATCTTGCAGAGGATTTTGCTGGTTCTGGCTTTGATAGGGACTTGCATGGTCATTGGTGTTGGTGTCCTTAAACCAGCTATTTCTGGTGATTATGACAAATTTTGTTTGTTTTGGTTTGAAATATGTATTTTGGGGTCTGCTAGTCACCCTGAGTTGTTTGAATTGAATGCAGTTTTCTCAGCGATGTCTGGCCTTGAGCTTTCAATGTCCAAGGAGCACCACAGATATGTAGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACGTTATGGCACACACAGAGTTGGCTTCTTGTTTGCTCCCATAGTTGGTATATGGCTTTTCAGCATTGGTGCCATCGGTATCTACAATATTTTTTACTGGAATCCTCATGTATACCGAGCACTCTCTCCATATTACGGTTTCCAATTTTTAAAGAAGACTCAGAGAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTATGCATAACAGGATCAGAAACCATGTTTGCTGGCCTTGGGCACTTTTCACAACTATCAATCAAGATTGCTTTCACCTGTGTGGTTTATCCATCTTTAATTCTTGCGTATATGGGGCAAGCTGCTTATTTTTCTAGGCATCATGATGTTGAGCATGAGTATCACTTTGGTTTTTATGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTGGTGATAGCCATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATTACAGGAACTTTCTCAATCATCAAGCAATGTTCTGCATTAAGTTGCTTCCCAAGAGTTAAAGTGGTTCATACTTCATCCAAAATTCATGGGCAAGTATATATCCCTGAGATCAACTGGCTGCTAATGCTCTTGTGTTTGGCTGTAACTATTGGTTTCAGAGACACAAAGCTTATGGGCAATGCACAAGGTTTAGCAGTTATCTCTGTGATGCTGGTGACCACATGTTTGATGTCACTCGTTATTGTACTCTGCTGGCACCAGAATGTTTTCCTTGCAATTGGGTTTGTTCTTTTATTTGGCACCATTGAGGCTCTCTTCTTCTCAGCTTGTGTTATCAAGTTCTTTGAAGGAGCATGGGTGCCAATTGTTTTGGCATTTGTGTTTCTGACTGTCATGTGTGTTTGGCACTATGGCACTCTCAAAAAGTATGAATTTGATGTTCAAAACAAGGTATCAGTCAACTGGCTACTAAGCCTTGGCCCTAGCTTAGGCTTTGTTCGAGTTCGAGGGATTGGCCTTGTGCACACGGAGCTAGTTTCTGGAATTCCTGCAATTTTCTCCCACTTTGTAACCAACCTGCCAGCATTCCACCAGATCCTGGTTTTCCTATGCATCAAACATGTTCCAGTTCCTCATGTTAGGCCTGAGGAAAGGTTCCTAGTTGGTCGTGTAGGTCCAAGAGATTTCAGACTCTACAGGTGCATAGTGAGATATGGATACCATGATGTCCACAAAGATGATGTTGAGTTTGAGAAAGATCTTGTGGGGAGCATAGCAGAGTTCATAAGAACAGGAAGTGGTGGGTTCAAGTTCAACTCTTCAAATGATGATAATATTGAAAAGGGTGATAAATTGACAGTTGTTGGGGCATGTTCTAGCCATCCCATCTTGGTGAGTGAGCATACTGAGGATGATGATGGTGTAGACTCAACTGAGATATCAGAGATAAAATCACCCAAGGTGACACAACAACCAAAGAAAAGGGTAAGGTTTATTGTTCCAGAGAGCACAAAGATTGACACTGGTGCAATGGAGGAGTTGCAGGAACTGATGGGAGCCAGGGATGTTGGGGTAGCTTACATTATAGGACAGTCCTACATGAGAGCCAAACCAGGGTCCAGCATGCTTAAGAAATTAGCTATTAATTTTGGGTATGAATTCTTAAGGAAGAATAGCAGATCACCCTCCTATGTACTCAGTGCTCCTCATGCATCATCTTTGGAAGTTGGGATGATGTACCAAGTTTAA 2427 0.4269 MDLERGIRQNSAKKKESWITVLSLAYQSLGVVYGEISTSPLYVYRNTFAENIGHTETNEEIYGVLSLVFWTFTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVGLLPNCQLADEELSEYKRDSYGVAPERSLASRLKSMLERHKILQRILLVLALIGTCMVIGVGVLKPAISGDYDKFCLFWFEICILGSASHPELFELNAVFSAMSGLELSMSKEHHRYVEVPAACIILIGLFALQRYGTHRVGFLFAPIVGIWLFSIGAIGIYNIFYWNPHVYRALSPYYGFQFLKKTQRGGWMALGGILLCITGSETMFAGLGHFSQLSIKIAFTCVVYPSLILAYMGQAAYFSRHHDVEHEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNAQGLAVISVMLVTTCLMSLVIVLCWHQNVFLAIGFVLLFGTIEALFFSACVIKFFEGAWVPIVLAFVFLTVMCVWHYGTLKKYEFDVQNKVSVNWLLSLGPSLGFVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPRDFRLYRCIVRYGYHDVHKDDVEFEKDLVGSIAEFIRTGSGGFKFNSSNDDNIEKGDKLTVVGACSSHPILVSEHTEDDDGVDSTEISEIKSPKVTQQPKKRVRFIVPESTKIDTGAMEELQELMGARDVGVAYIIGQSYMRAKPGSSMLKKLAINFGYEFLRKNSRSPSYVLSAPHASSLEVGMMYQV. 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03809 808 Pfam K+ potassium transporter 26 177 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03809 808 Pfam K+ potassium transporter 206 635 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03809 808 NCBIfam potassium uptake protein 206 808 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03809 808 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 807 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03809 Seca-Chr11 98929052 98934912 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03809 1 808 Inorganic Solute Cotransporters AT1G70300 69.939 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03809 K03549 - gmx:100784861 1330.08