Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03807 ATGAAGGGGGATAGGATTGAAGAGAGCAGTGTGAGGTTGTTGGGTAGAAAAGGCAGCAACAGCAGCAGCAGTGAGTCTAGGTGGGTTGATGGCAGTGAAGTGGATTGGGATGAAGCTGCTTCATGGTCTAGGCACCATGGAAATGATGGTAGAGAAGGATATGGATCAATCAGAAGGAGACTTGTCAAGAAGCCCAAGAGAGTTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAAGTCATGGTCAACACTCCAAGGAGCTTTCCCTTTGGCCTACACTTGCATTAGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGCTGATGTCTTTGGCAAGGTTCCAATTGGTTCAGATGTTGATGTCTTGGGGGCGTTATCATTAGTAATGTATACAATAGCCATTGTTCCATTAGCGAAATATGTTTTCATAGTCCTCAAGGCAAATGATAATGGAGAAGGAGGAACATTTGCGCTATACTCGTTGATCTGCAGGTATGCAAATGTGAATCTGCTTCCAAATCGTCAACAAGCTGATGAACATATCTCTAGTTTTAAGCTCCAACTGCCTACTCCAGAACTGGAAAGGGCTTTAAAAATAAAGGATACTTTGGAAAGGTCATCATCTTTGAAAAACGTGTTGTTGGTGTTGGTTCTTCTGGGAACCTCCATGATTATTGGAGATGGTATTTTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTGCAGGGTCAAATAAATGGATTTGGTACAGGTGAAGTGGTTTGCGTATCTATTGTAGTCTTGGTGGCTTTGTTCAGCATACAACGATTTGGCACCAGTAAAGTGGGTTTCATGTTTGCCCCTGTACTTTCTTTGTGGTTCTTTTGTCTGGGTTCTATTGGAATATATAATATACTTAAGTATGATACTACTGTTCTGAGAGCATTCAATCCAGCTTACATCTATTATTTCTTCAAGAAAAATGGCAAAGGTGCTTGGTCAGCTCTCGGCGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTGGGTCATTTTTCTGTACCAGCAATCCAGATTGCCTTCACCTGTGTTGTATTTCCCTGTCTCCTCCTTGCATATATGGGCCAAGCTGCATATTTGATGAAGAATCCAACTTCTTATTCAAGCATTTTCTACAAATCTGTTCCAGGTGATATTTTGTTTGTGCTGTGTGAAACAGAGAGTCTCTTCTGGCCAGTGTTTGTTATAGCCACACTTGCCGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGTGTGAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCAAGAAAGTTCATGGGTCAAATTTACATCCCTGTAATTAATTGGTTTCTGATGATCATGTGCATAGTTGTGGTTTCCATCTTCCAAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGGTTAGCACCACCTTAGTGACACTTGTAATGCTTTTAATTTGGCAAACTAACTTGTTTTTGGCACTATGTTTCCCACTTCTATTTGGTTCAGTGGAGCTCATTTACATGTCATCTGTCCTTTCAAAAATCTCTGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTTTTCCTCTCTGTAATGTACACATGGAACTATGGGAGTGTATTGAAGTACAGAAGTGAAGTTAGAGAGAAGGTTTCATCAGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTATACAATGAGCTTGTCCAAGGCATTCCTTCCATTTTTGTGCAGTTCCTTCTGAGCCTTCCAGCTCTTCACTCTACTATAGTTTTTGTCTGCATTAAATATGTTCCAGTCCCTGTGGTTCCTCAAGAAGAAAGATTTCTATTCCGAAGAGTTTGCCCAAAAGATTACCACATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATTCAAAGTCTTGAAAAATTCTTGAGAAGGGAAGCTCTAGAAACTGCCTTGGAAATGGAGGGTAACTTAACTGATGATGTGGACAGTGTCTCAGTGAATACAAGGGATTCTGATATTCCTGCTGGTAGTGGGGCAGAGGAGCTTAGGATTCCACTGATGCATGGTCAGAATTTGGAAGAAACAGTAACCGGTACCTCTCAGGAAGGTGCATCAGCATTACCATCTAGTTACATGTCATCAGAAGAAGATCCTAGTCTTGAATATGAGCTTTCGGCACTTAGAGAAGCAATGGAATCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGGATTCTTTTTTCTTTAAGAAATTGGTGATAAATTATTTCTATGGATTTCTCAGAAAGAACTGCAGAGGAGGCACTGCAAACATGAAAGTACCCCACACTGACATTATTCAAGTGGGGATGACATATATGGTCTGA 2559 0.4162 MKGDRIEESSVRLLGRKGSNSSSSESRWVDGSEVDWDEAASWSRHHGNDGREGYGSIRRRLVKKPKRVDSFDVEAMEIAGSHGQHSKELSLWPTLALAFKTLGVVYGDMGTSPLYVFADVFGKVPIGSDVDVLGALSLVMYTIAIVPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEHISSFKLQLPTPELERALKIKDTLERSSSLKNVLLVLVLLGTSMIIGDGILTPAISVMSAISGLQGQINGFGTGEVVCVSIVVLVALFSIQRFGTSKVGFMFAPVLSLWFFCLGSIGIYNILKYDTTVLRAFNPAYIYYFFKKNGKGAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAYLMKNPTSYSSIFYKSVPGDILFVLCETESLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLALCFPLLFGSVELIYMSSVLSKISEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVREKVSSDLMLDLGSNLGTVRVPGIGLLYNELVQGIPSIFVQFLLSLPALHSTIVFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIQSLEKFLRREALETALEMEGNLTDDVDSVSVNTRDSDIPAGSGAEELRIPLMHGQNLEETVTGTSQEGASALPSSYMSSEEDPSLEYELSALREAMESGFTYLLGHGDVRAKKDSFFFKKLVINYFYGFLRKNCRGGTANMKVPHTDIIQVGMTYMV. 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03807 852 MobiDBLite consensus disorder prediction 1 31 - -
Seca11g03807 852 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 88 850 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03807 852 Pfam K+ potassium transporter 98 681 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03807 852 MobiDBLite consensus disorder prediction 14 29 - -
Seca11g03807 852 NCBIfam potassium uptake protein 97 851 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03807 Seca-Chr11 98868301 98876489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03807 4 852 Inorganic Solute Cotransporters AT1G60160 73.131 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03807 K03549 - gmx:100814419 1429.46