Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03801 ATGTCTTGTAAAATGTTTCTCTATAAATTACGAATTGCTTGCTCTGCTTCGAAACAGGGTTGTGATGGGTCAATACTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTACACCTCCTAACTATCATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGAAGTATGCCCTGGTGTGGTGTCATGTGCTGATATTGTAGCAATTGTTGCTCGTGACTTTGTTGTCATTCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAGACGATCAGCTTCCAAACTGCTATCAATGTGCTTCCATCTCCCTTTTCTGACCTTAGCACTCTTATCTCAAGATTTGAAGATCAAGGGCTCTCTACCAAGGACATGGTTGCCTTATCTGCAGTCCTAGACTTCAAAACTCCCAATCACTTTGATAACATGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTCAATCTGATCAGGTTATCTTCAATGGAGGGTCTACAGATTCATTGGTTATAACTTACAGCAACAATCCCAAGGCATTTGAATATGACTTTGTTAATGCAATGATTAAGATGGGAGACATCAAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCAGTGCAGGTTTCCTAATTAG 669 0.4036 MSCKMFLYKLRIACSASKQGCDGSILLDDTSSFKGEKTTPPNYHSLRGFEVIDAIKSKVEEVCPGVVSCADIVAIVARDFVVILGGPFWKVKLGRRDSKTISFQTAINVLPSPFSDLSTLISRFEDQGLSTKDMVALSAVLDFKTPNHFDNMYYKNLINKKGLLQSDQVIFNGGSTDSLVITYSNNPKAFEYDFVNAMIKMGDIKPLTGSNGQIRKQCRFPN. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03801 222 PRINTS Plant peroxidase signature 85 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Plant peroxidase signature 47 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Plant peroxidase signature 66 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Plant peroxidase signature 7 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 SUPERFAMILY Heme-dependent peroxidases 16 222 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Haem peroxidase superfamily signature 142 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Haem peroxidase superfamily signature 67 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PRINTS Haem peroxidase superfamily signature 85 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 Gene3D Peroxidase, domain 2 140 201 - -
Seca11g03801 222 Gene3D Peroxidase, domain 2 111 139 - -
Seca11g03801 222 ProSiteProfiles Plant heme peroxidase family profile. 19 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 CDD secretory_peroxidase 19 220 IPR033905 GO:0004601|GO:0042744
Seca11g03801 222 Gene3D - 202 222 - -
Seca11g03801 222 Pfam Peroxidase 142 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 Pfam Peroxidase 16 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 PANTHER PEROXIDASE 72-RELATED 19 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca11g03801 222 Gene3D - 19 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03801 Seca-Chr11 98521291 98523706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03801 19 222 Peroxidase AT5G58390 54.582 6.29e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03801 K00430 - gmx:100812478 286.574