Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03797 ATGCTTATGCCTCAATATTTTGTAATTTTGAAATTTGTTTGTGTTGCAGCAGTCTGTTCTATTTATTTTCTTCCTCGAGATTTAATCTACAATTCAGTAATTGCACATTCATGCAGGCTAATATCAGACTTGGTGGTCGTCATAGTTTCTGCAGCCATTGGTGGAATTGTTTTTTCCTGTTTGGGGCAATCGGTTATCGTGGGCTATCTCCTTGCAGGCTTACTTATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTACAGGTCGAGACTGTTGCACAGTTTGGGGTAGTGTTTCTTCTCTTTGATTCCGGGCTGGAGTTTTCCTTGGCAAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGGCTGCTTCAAATTGTAATATTCATGTTCCTTTGTGGCATTCTTTCCATGTTATTTGGTGCCAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTTTTTCAATGTCATCAACAGCAGTGGTGGTAAAGTTTTTGGTGGAGCGGAATAGTAATAGTGCTCTTCACGTTCAAGTCACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCAGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGAATAATTTCAATGGGAAAACTGTTGCTAGTGTTGTCCTTGTATCTCACTGCTACATCTATATTGTCTTGGTCATTTGTTCCTTGCTTTCTTAAACTGATGATGCGACTCTCTTCTCAGACAAATGAACTTTATCAGCTAGCTTCCGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCTACAACAGACTTTGGTCAACATACTTTGGACCGGGTAGAACCAATTCGTAACCTATTTGCAGCTCTCTTCCTGTCGAGTATTGGAATGCTTATATATGTGCATTTCCTTTGGAACCATGTGGATATCTTGCTGGCATCTGTCATTTTGGTTATAGTTGTTAAAACTACTGTTGCTACTATAGTTACAAAGGCCTTTGGGTACAGCATTAAGACATCATTTATCGTTGGTATCTCGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCTTGAGTCACGCTTCAAATCTTCATCTTGTCGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGACTGTCAGTCTGGTTACAACGCCACTTTTGTTTAAATTGATACCTGCTGTGATGAATCTGGGTGTTCTCATGCACTGGTTTCCCTCTGAAAGTAGCACACCTAATGAGGGGAAAGCTTCAATGAATGAAGCAAACAGAATGTTGTGA 1353 0.405 MLMPQYFVILKFVCVAAVCSIYFLPRDLIYNSVIAHSCRLISDLVVVIVSAAIGGIVFSCLGQSVIVGYLLAGLLIGPGGLKFISEMVQVETVAQFGVVFLLFDSGLEFSLAKLKAVGPVAVLGGLLQIVIFMFLCGILSMLFGAKLSEGVFVGSFFSMSSTAVVVKFLVERNSNSALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIISMGKLLLVLSLYLTATSILSWSFVPCFLKLMMRLSSQTNELYQLASVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFGQHTLDRVEPIRNLFAALFLSSIGMLIYVHFLWNHVDILLASVILVIVVKTTVATIVTKAFGYSIKTSFIVGISLAQIGEFAFVLLSHASNLHLVEGKMYLLLLGTTTVSLVTTPLLFKLIPAVMNLGVLMHWFPSESSTPNEGKASMNEANRML. 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03797 450 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 33 444 IPR045158 GO:0015386|GO:0071805|GO:1902600
Seca11g03797 450 Gene3D - 37 422 IPR038770 -
Seca11g03797 450 Pfam Sodium/hydrogen exchanger family 45 414 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03797 Seca-Chr11 98473791 98480938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03797 39 448 Antiporters AT5G51710 82.238 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03797 K26735 - gmx:100799476 672.544