Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03795 ATGAAATATGAAAGGCCTATTGATCCTACTTCAGGGGATCAACCTTTGTACAACGAAGAAAAGACTGTTTTTGTCACTGTAAATGGGGAGATATACAATCATAAGCAATTGAGACAGAAATTGGATTCCCATCAATTTCGAACTGGTAGTGATTGTGAAGTGATTGCCCATTTGTATGAAGAATATGGAGAATTTGTTTATATGCTGGATGGGATGTTCTTCTTTGTCCTTATTGATACTAGAGATAAAAGTTTTATTGCTGCTCGTGATGCCATTGGGATTACCCCTCTTTACTTGGGCTTTGGTCATGATGGATCAACATGGTTTGCATCTGAAATGAAAGCTCTGATTGACGATTGTGAGAGATTCATATCTTTTCCTCTAGGGCATATATATTCCATCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGGTACTCAGAGCATATTCCATCAACACCCTATGATCCAATTATTTTTCGTGAAGCCTTTGAGAGGGCTGTATTTAAGAGAATGATGATTGAGACAGATTCACCATACCATGAAATGAAAAATACTCATGCAGGAATTGTAGCTGTGACATTGCTGGCTTGTGGTTGCTGTAATGGCCTTTATCAGAACTTGGACCGATTGGATTCAACTCTGAAGGAGAGAAAAGCAGTGTTGTTTTCTCATTGTTCCTTTGTTGATTTCAATTTCCTTTCTTGGTTTCAAGTTGGTATTGGTTGA 735 0.3823 MKYERPIDPTSGDQPLYNEEKTVFVTVNGEIYNHKQLRQKLDSHQFRTGSDCEVIAHLYEEYGEFVYMLDGMFFFVLIDTRDKSFIAARDAIGITPLYLGFGHDGSTWFASEMKALIDDCERFISFPLGHIYSIKQGGLRRWYNPPWYSEHIPSTPYDPIIFREAFERAVFKRMMIETDSPYHEMKNTHAGIVAVTLLACGCCNGLYQNLDRLDSTLKERKAVLFSHCSFVDFNFLSWFQVGIG. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03795 244 CDD AsnB 7 144 IPR033738 -
Seca11g03795 244 Pfam Glutamine amidotransferase domain 7 117 IPR017932 -
Seca11g03795 244 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 5 144 IPR029055 -
Seca11g03795 244 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 7 149 IPR029055 -
Seca11g03795 244 PANTHER ASPARAGINE SYNTHETASE 7 177 - -
Seca11g03795 244 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 137 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03795 Seca-Chr11 98470439 98471173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03795 22 181 PRT Gene Family AT2G16570 29.834 5.63e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03795 K01953 - gmx:100788806 317.775