Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03759 ATGTATAGTAATCAGTACCTTAATGAACTCTATCATACAGTACACAGAGTGAACTTACTCAGAGATAATAGTCTGGCAGAGGTTGGAAGAACTATTATCTGTGTTTCAAATGCCATATTGATGGTTTTGTATCGTGGTCCAGTTTTGATAGGACAAGAAGAAATTGATCAGATGGATGAATTTTGTGAAGGTTCATGTGTTAACCTTGATGACGACAATATAGATATTAATGTTACTTGTGATGAATTTGATGTAAACCATAGTGAAGATGAAAATGATTCGGGTGGTCCTAGTGTGGAGGAAGAGTTAGGTAAAATGGATCATAGAGGTAAAAGAATGGAAGATTTGACTCCTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGAGCATGGTGAGATATTTTATAGGGCATATGCAAAGCGTCATGGATTTGTTGTTAGAAAGGATGAGATTAATCGGGACATTAAGGGCAATGTTATTATGCGTCAGTTTGTTTGCAACAAAGAGGGTAGTAGGAACAAAAAACATTTGATGAGGCAAGTGGAAGTGAAAGTCAGTGGTAGTCATGATGGGAAGGCAAGGGAATGCACACAAAATGTTAGTTTGAATCATAATGTGGGTAATAAAGGGAAGGAAAAAGAGGTTCATGTCTTGCCACAAAATTCAGTCCAAAACTCTAAAATTCGTCCTATTGCTCCTTCTTTTATGCACCCCTTTCACAACTCTATATTTGGTCCTGGTATGCCAAGCCAAACGATGCCTATGCCCCATCCTCAGTACGGTTATGTTCCTATGTACCCAACCGGTTATCCCATGGTTTACCCTAATATGGTTATGCAAAACCCACAGAAAGCTCCCGCTGGTACTTCTTTGGATCATTTGCGTGGTGTAGTCAATAATAATGGAAAAGGAGTAGGTAGCAAACCCACTGAGCATATGAAAACCAAGGATTGA 957 0.3877 MYSNQYLNELYHTVHRVNLLRDNSLAEVGRTIICVSNAILMVLYRGPVLIGQEEIDQMDEFCEGSCVNLDDDNIDINVTCDEFDVNHSEDENDSGGPSVEEELGKMDHRGKRMEDLTPVDIRNMEFASEEHGEIFYRAYAKRHGFVVRKDEINRDIKGNVIMRQFVCNKEGSRNKKHLMRQVEVKVSGSHDGKARECTQNVSLNHNVGNKGKEKEVHVLPQNSVQNSKIRPIAPSFMHPFHNSIFGPGMPSQTMPMPHPQYGYVPMYPTGYPMVYPNMVMQNPQKAPAGTSLDHLRGVVNNNGKGVGSKPTEHMKTKD. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03759 318 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 65 178 - -
Seca11g03759 318 Pfam FAR1 DNA-binding domain 135 181 IPR004330 -
Seca11g03759 318 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03759 Seca-Chr11 96876257 96880755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03759 6 58 Nodulin-like Gene Family AT3G45870 39.623 8.73e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g03759 FAR1 4.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03759 - - ccaj:109792835 100.908