Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03746 TTGGGAGATGATGATCTGTTTACACAACTATGGAAGTTGTGTGCAGGGCCTTTGGTGGATGTTCCTCGTGATGGAGAGCGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAACTTCAAGCCTCAACAAATCAGGAACTGAGCCAGCAAATTCCTCATTTCAATCTCCCCTCTGATACTAGCACACATGGAGGATTTTCAGTTCTGCGGAGGCATGCTACCGAGTGCTTACCTGAATTGGACATGACCCAAATAACCCCAACCCAGGAACTAGCAGCCAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTAATTTGGTTTGGATTTCTGTTTTAGTTGCATATTCCAATTTCCAAGTTTGTATGAATGAATATCATGAGTAG 399 0.4336 LGDDDLFTQLWKLCAGPLVDVPRDGERVFYFPQGHMEQLQASTNQELSQQIPHFNLPSDTSTHGGFSVLRRHATECLPELDMTQITPTQELAAKDLHGFEWKFKHIFRGNLVWISVLVAYSNFQVCMNEYHE. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03746 132 SUPERFAMILY DNA-binding pseudobarrel domain 57 110 IPR015300 -
Seca11g03746 132 Gene3D - 56 127 IPR015300 -
Seca11g03746 132 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 57 109 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03746 Seca-Chr11 95912436 95913026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03746 3 57 B3 DNA Binding Superfamily AT2G46530 76.786 7.52e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03746 K14486 - tcc:18606737 160.999