Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03725 ATGGACGAGACTACAGTGCCTCCATATGTAGATTTACAGGTTGGAGAACCAACGTTTGTATTTGAAGCTAAAGCCATTCAAAGAATGGAACTACTGGTATTAAGTACGTTGAGATGGAAAATGCAAGCTCTAACTCCATGTTCTTTCATAGACTACTTCCTCAGAAAGATGACTTGTGAGCAGCATCCAGCAATGTCATCTATTTTGAGATCAGTGGAGCTCATCCTTAACATAATTAAATGTACTGATTTCTTGGAATACAGACCTTCTGAAATTGCCGCGGCAGTGGCAATTTCTGTTTCAAGGGAGTTGCAAGCAAAAGAGATTGATGAGGCCTTATCTTGTTTGGTCATTGTAGAGAAGGAGAGAATGTTGAAGTGTCTTGGACTGATAAGAGATTTGTTCTTCTTCAAAGTTTCTGGTAATTTAGGCAGCCCTGTTGGGGTGTTGGATACTGCATGCTTGGGCTCTAAAAGTGAGGAATTAACAGTTGAATCGTATACAAATTCTTCCCATAACAGTTCAAATACTAAGAGGAAAAAATCAGAGGGACCTTCTGATGGGTCTTGCTAG 573 0.3997 MDETTVPPYVDLQVGEPTFVFEAKAIQRMELLVLSTLRWKMQALTPCSFIDYFLRKMTCEQHPAMSSILRSVELILNIIKCTDFLEYRPSEIAAAVAISVSRELQAKEIDEALSCLVIVEKERMLKCLGLIRDLFFFKVSGNLGSPVGVLDTACLGSKSEELTVESYTNSSHNSSNTKRKKSEGPSDGSC. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03725 190 SMART Cyclin_C_2 44 170 IPR004367 -
Seca11g03725 190 MobiDBLite consensus disorder prediction 176 190 - -
Seca11g03725 190 SUPERFAMILY Cyclin-like 27 131 IPR036915 -
Seca11g03725 190 CDD CYCLIN_AtCycD-like_rpt2 45 131 - -
Seca11g03725 190 Gene3D - 43 128 - -
Seca11g03725 190 MobiDBLite consensus disorder prediction 165 190 - -
Seca11g03725 190 Pfam Cyclin, C-terminal domain 45 135 IPR004367 -
Seca11g03725 190 Gene3D - 4 42 - -
Seca11g03725 190 FunFam D6-type cyclin 33 129 - -
Seca11g03725 190 PANTHER CYCLINS 18 119 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03725 Seca-Chr11 93441001 93442237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03725 1 112 Core Cell Cycle Gene Families AT5G65420 58.407 4.57e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03725 K18810 - gmx:100794010 219.55