Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca11g03723 | ATGAGTTCCAATTCTAAACAAAATAAGCTTCCTATAGAAGAAACAGAGGTTGATGAAGCTTACCTCTCTGCTCTGTTTCTAAGCTGTAGCAGGGTCTTTCCTGCAATTCTTAACGTTGCTGTTGATCTTAATTTGTTTGACATAATTGCTAAGGCACAAAGTTTAAGTTGTTCATCCTTGTCTGCCTCTGAAATTGCTTCTCAATTTCCAAAACAACACCTGGAATTGGCAAAAAGGCTTGAACGCATGTTGCCTGTGTTGACTAGTTATTCTCTTGTGACTTGCTCCATTCGCACCAATGAAGATGGTAAAAGAGAAAGAGTTTATGCTCTCCCTCCCGTTGGTCAATACTATGTATGTGACAAAGACGGAGAATCTTTGGGTCCATTCTCATCTTTAGTGCATCGACGATTTCGTCAAGTTTGGTAA | 429 | 0.3963 | MSSNSKQNKLPIEETEVDEAYLSALFLSCSRVFPAILNVAVDLNLFDIIAKAQSLSCSSLSASEIASQFPKQHLELAKRLERMLPVLTSYSLVTCSIRTNEDGKRERVYALPPVGQYYVCDKDGESLGPFSSLVHRRFRQVW. | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca11g03723 | 142 | Pfam | Dimerisation domain | 36 | 88 | IPR012967 | GO:0046983 | |
Seca11g03723 | 142 | SUPERFAMILY | "Winged helix" DNA-binding domain | 16 | 122 | IPR036390 | - | |
Seca11g03723 | 142 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 25 | 142 | IPR016461 | GO:0008168 | |
Seca11g03723 | 142 | FunFam | Caffeic acid 3-O-methyltransferase | 2 | 118 | - | - | |
Seca11g03723 | 142 | Gene3D | - | 1 | 118 | IPR036388 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca11g03723 | Seca-Chr11 | 93432861 | 93433289 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca11g03723 | 1 | 127 | Monolignol Biosynthesis Gene Families | AT5G54160 | 38.583 | 1.86e-19 | 80.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca11g03723 | - | - | aprc:113869089 | 190.274 |