Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03709 ATGGAGACAGATAACGGAACCCGAGGCAGCAGATCCGAATCCGGAACCGATCACCTCCTCCGTCCATGCGCCGCCGCGCTTTCGCGCCGTGACTTCACTGCTTGCCGCGAGCTCGCCTATCGGGTTCCAAGATCCGACCCGAATATCACCTCCCAAGTGGACCAAATCCTTGCGATAACCGATGTTCTCAGCGCTGCCTCTCGCCGCCTCGGCAACAGCCACAACCTCGACTGGTACTCCATCCTTCAGCTCCGCCCCGCCGATGCCGAAAACCGCGACCTCGCGAGGCAGCAGTTCAAGACACTCGTCCGCCTCCTTGACCCAAACAAGAATAAGTTTCCACTCGCTGACGATGCCCTCATGCGCGTCCGTGAAGCCTGGTCCATTCTCTCTGACCCAGTTCGGCGAGGCCAGTTTGACAGTGAGATTCGCGGAGATGGCACCGGCCCAACGTCGTTTTGGACAATGTGTCCTTACTGTTGGTTTCTCCATGAGTATGAGACTATGTATGAGGATTGCACCTTAAGATGTGGGAATTGCCGGAGGACATTTCACGGTGTGGCGGTGAAGCCGCCGGCGCCTGAGACTTTGGTGGAGGGGAAGGAGCAGTATTATTGCTACCACTTGAGTTTGCCCTTGAGGTACCCTGTGGATGAAAGATGCGGTTTTGGTGACAATAGCGAGAAAATGGATGTTCATGGTAATGGGAAAAGGAGACTGAGGATAAAAACTGTGGCTCATAGAGTCAGAATGAAAGGGTTTGTTGAACCTGATCGTGACTAG 783 0.5466 METDNGTRGSRSESGTDHLLRPCAAALSRRDFTACRELAYRVPRSDPNITSQVDQILAITDVLSAASRRLGNSHNLDWYSILQLRPADAENRDLARQQFKTLVRLLDPNKNKFPLADDALMRVREAWSILSDPVRRGQFDSEIRGDGTGPTSFWTMCPYCWFLHEYETMYEDCTLRCGNCRRTFHGVAVKPPAPETLVEGKEQYYCYHLSLPLRYPVDERCGFGDNSEKMDVHGNGKRRLRIKTVAHRVRMKGFVEPDRD. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03709 260 Gene3D DnaJ domain 73 144 IPR036869 -
Seca11g03709 260 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 219 - -
Seca11g03709 260 ProSiteProfiles dnaJ domain profile. 77 143 IPR001623 -
Seca11g03709 260 SUPERFAMILY Chaperone J-domain 73 144 IPR036869 -
Seca11g03709 260 CDD DnaJ 77 132 IPR001623 -
Seca11g03709 260 Pfam DnaJ domain 77 140 IPR001623 -
Seca11g03709 260 SMART dnaj_3 76 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03709 Seca-Chr11 92896133 92896945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03709 10 215 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.242 1.08e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03709 - - gmx:102659715 327.02