Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03690 ATGGTTCACCGTCTTCCTCCTCTTCCACATCTCCCTCCGTTTCCCCTCCCTCTCTATCCGCCTCTGGGACTCCGACGGCGAGTTCCTCCTCATCGAAGCCGCCTTCCACCTCCCTCACCGGCTCAACCCCGACACCTCCCTCCACCGCGTCTTCATCCACTCCGGGCTAGGGTTCCGGCGTCAGTGGCGCAGGTTTTGAAGCACGAGCCCTGCTTGATTTCACTGGCAGTGGAAGGGTTCTATGACACGAACGTGGATTCCATGAAGTTCGCAGCGAAGATGGAGAGGGGAAGGAAGTGTGGTGCTATAGAGAAAGTTGTTGAGAGGAGACAAAGACGAATGATAAAAAATAGAGAATCAGCAGCAAGGTCTCGGGCTCGCAAGCAGGCCTACACTTTCGAACTAGAGGCTGAAGTTGAAAAACTTAAGGAAGTAAACAGGGAATTACAAAGAAAACAGGCAGAAATTATGGAAATGCAGAAAAATAAGGTGAGTTCAAGCAATTCCCAGGGAGGTTTCAAATTTCTTGAAAATGCTAAGGATTTGCCAACCATTAGTAAGTCCAGAAACCAAACCCAAATTTGTTGGTTTAACTTCTTCTAG 603 0.4909 MVHRLPPLPHLPPFPLPLYPPLGLRRRVPPHRSRLPPPSPAQPRHLPPPRLHPLRARVPASVAQVLKHEPCLISLAVEGFYDTNVDSMKFAAKMERGRKCGAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVEKLKEVNRELQRKQAEIMEMQKNKVSSSNSQGGFKFLENAKDLPTISKSRNQTQICWFNFF. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03690 200 Coils Coil 128 162 - -
Seca11g03690 200 Pfam bZIP transcription factor 109 162 IPR004827 GO:0003700|GO:0006355
Seca11g03690 200 MobiDBLite consensus disorder prediction 33 52 - -
Seca11g03690 200 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 107 164 - -
Seca11g03690 200 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 86 158 IPR043452 GO:0003700|GO:0045893
Seca11g03690 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Seca11g03690 200 CDD bZIP_plant_BZIP46 109 163 - -
Seca11g03690 200 Pfam SGT1 protein 51 96 IPR010770 -
Seca11g03690 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 158 IPR004827 GO:0003700|GO:0006355
Seca11g03690 200 Gene3D - 107 165 - -
Seca11g03690 200 MobiDBLite consensus disorder prediction 25 52 - -
Seca11g03690 200 SUPERFAMILY Leucine zipper domain 109 156 IPR046347 GO:0003700|GO:0006355
Seca11g03690 200 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03690 Seca-Chr11 92117763 92119284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03690 94 164 bZIP Transcription Factor Family AT3G19290 73.611 1.32e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g03690 bZIP_1 1.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03690 K14432 - mof:131156537 118.627