Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03677 ATGTTACTTCTTGGTGCATGCACCAAGCCTCCATGCTTGTCAATGGTAACTGAATATATAGAAATGGGATCTTTGTTTTACTTGATTCATGTTAACGGTCAAAAGAAGAAGCTTAGCTGGCAAAGAAGACTAAGGATGTTGGTGATGTGTGCAGGTAAGTATTTTGGTTATTCATACCTTCAGAACATGTTAAAGGGTTGGTTTGAAATTGGTTTTGAGTAG 222 0.3739 MLLLGACTKPPCLSMVTEYIEMGSLFYLIHVNGQKKKLSWQRRLRMLVMCAGKYFGYSYLQNMLKGWFEIGFE. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03677 73 SUPERFAMILY Protein kinase-like (PK-like) 3 48 IPR011009 -
Seca11g03677 73 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03677 Seca-Chr11 91780476 91780697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03677 1 52 MAP Kinase Kinase Kinase AT2G31010 73.585 6.26e-23 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Seca11g03677 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03677 - - pvu:PHAVU_011G129600g 86.6557