Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03649 ATGAGATATGACAAGACGATAGAGATAACGGGAGTTCTTCTTGGTGTTGTTATACCAGTTTGTGGCCTACTAATTGGGATGATTGGTGTTGGAATCATACTATTCCGAAGAAAAGCCAAACAACTTGACGAAGAGTCCAAAAGCATTGAAAATGATATTCAGTCTATTTGCATGGTATGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACAAATGACTTCAATGACAAGTACTGCATCGGAAAAGGAGGATTTGGGAGTGTTTATAAAGCAGAATTACCTACAGGTCTAGTAGTGGCTGTTAAAAGGCTCAACATATCAGACTCAGATGACATTCCAACAGTGAACCGCCAGAGTTTTTTGAATGAGATAAAAACATTGACAGGAGCGAGGCACCGCAATATAATAAAGCTTTATGGTTTCTATTCTAGAAGGAAACAAATGTTTTTGGTTTATGAATATGTAAACAAAGGAAGTTTAGGAAAGGTGCTGTATGGAGAAGAAGGAAAATTGGAGCTAAGCTGGGCTACAAGGGTGAAAATTGTGCAGGGAATAGTACATGCAATTTCCTACCTGCACAGTGATTGCTCCCCACCAATTGTACATAGAGATGTAACAATGAATAACATACTACTGGACTCATACTTTGAACCACATCTTGCAGATTTTGGCACAGCAAAGCTGCTAAGTTCCAACACTTCAACCTGGACATCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTCACTGATAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTAGAGATAATGATGGGAAACCACCCTGGAGAACTGTTGGCTACACTGTCTTCAAACAAGTCTTTGTCATCAATAGAGGATTCACAGGTTCTTCTGAAGGATGTGCTAGACCAACGCCTTCCACCTCCAACAGGCCAATTAGCTGAAGCAATAGTGTTCACAGTGAGTGTAGCTTTGGCATGCACGCGTGCAGCTCCAGAGTCCAGACCCATGATGCGTTCTGTGGCATAA 1050 0.4171 MRYDKTIEITGVLLGVVIPVCGLLIGMIGVGIILFRRKAKQLDEESKSIENDIQSICMVWGRDGKFTFSDLVKATNDFNDKYCIGKGGFGSVYKAELPTGLVVAVKRLNISDSDDIPTVNRQSFLNEIKTLTGARHRNIIKLYGFYSRRKQMFLVYEYVNKGSLGKVLYGEEGKLELSWATRVKIVQGIVHAISYLHSDCSPPIVHRDVTMNNILLDSYFEPHLADFGTAKLLSSNTSTWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVALEIMMGNHPGELLATLSSNKSLSSIEDSQVLLKDVLDQRLPPPTGQLAEAIVFTVSVALACTRAAPESRPMMRSVA. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03649 349 Gene3D Phosphorylase Kinase; domain 1 38 158 - -
Seca11g03649 349 ProSitePatterns Tyrosine protein kinases specific active-site signature. 204 216 IPR008266 GO:0004672|GO:0006468
Seca11g03649 349 Gene3D Transferase(Phosphotransferase) domain 1 159 349 - -
Seca11g03649 349 Pfam Protein kinase domain 80 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03649 349 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Seca11g03649 349 FunFam Leucine-rich repeat receptor protein kinase MSP1 40 158 - -
Seca11g03649 349 FunFam MDIS1-interacting receptor like kinase 2 159 349 - -
Seca11g03649 349 ProSiteProfiles Protein kinase domain profile. 78 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03649 349 SUPERFAMILY Protein kinase-like (PK-like) 58 348 IPR011009 -
Seca11g03649 349 PANTHER LEUCINE RICH REPEAT KINASE 2 18 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03649 Seca-Chr11 91432257 91434222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03649 12 252 Receptor kinase-like Gene Family AT4G08850 45.492 1.25e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca11g03649 Pkinase 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03649 - - gmx:100786462 550.051