Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03644 ATGGCTATGGGAAGGAGTTACATTGATAATAAAGATTTTGAAGAGGAGAAAGAATTCTACAGAAACGCTGTGAATTTGAACGAAAAGCAAGGAAAGAGAGGCCTACTAGAGACCAAAGACAAAAGAAAAGATGACCAGATTAAAGATGATGACTATCTTTTGGGTGAAGCTAGGCAACCACTATGGCGCAAAGTGGCAGTACCTTCAAGCCTAATCAACCCATATCGCATAGTCATCATCCTCCGTCTCATAATCCTACTTTTCTTCTTCCAATTTCGTATCACAACACCAGTGCATGACGCATTTGCCTTGTGGCTAATCTCTGTGGTGTGTGAGTTCTGGTTAGCACTGTCTTGGTTTGTTGACCAGTTCCCCAAGTGGTTCCCCATCACTAGAGAAACTTACTTGGACCGTTTGTCTATAAGGTTCGAGCGTGAAGGGGAACCAAGCCTTCTAGCCCCACTTGATGTCTTTGTCACCACTGCTGACCCTTTGAAGGAACCACCCATCATCACTGCAAACACTGTTCTATCAGTGTTATCTGTTGATTACCCTGTTGAGAAGGTCACCTGTTATGTCTCAGATGACAGTGCATCTATGCTTGCCTTTGATACACTGGCTGAGACTTCTGAGTTTGCAAGAATATGGGTTCCTTTTTGTAAAAAGTACAATATTGAGCCAAGGGCTCCCGAGTTTTATTTCTGTCAGAAAATTGATTACTTGAAAGATAAGGTGCACCCCACATTTGTAAAGGATCGCAGGGCCATGAAGGTGAGAGAGTATGAAGAATTTAAAGTGAAAATTAATGCATTGGTTGCAAAGGCTCAGAAAAAACCAGAAGAAGGGTGGGTGATGCAGGATGGTAATCCATGGCCTGGGAATGACTCTCATGATCATCCAGGAATGATTAAGGAAATAAATAGTCTAGTGTATGGACTTGGCTTTTTGCAAGTCTATCTGGGAAGTTCTGGTGCACGGGACAAGGATGGGAAGGAACAACCAAGGCTTGTGTATGTTTCACGGGAAATACGTCCCTGCTATCAACACAACAAAAAAGCCGGTGCCATGAATGCTTTGCTTCGAGTTTCTGCTGTGCTTACCAATGCACCTTTCGTGTTGAATCTGGATTGTGATCATTACACCAATAATAGCAAAGCTATAAGGGAGGCTATGTGCTTTTTAATGGATCCCCAACTTGGGAAGAAACTTTGTTATGTTCAATTTCCAAAAAGGTTTGATGGTGTTGATCACCATGACAGATATTCCAATCACAATACTATATTCTTTGATATCACCATGAAATGCCTTGATGGGATTCAAGGTCCGGTGTATGTTGGTACTGGATGTGTGTTCAATAGGCAGGCATTATATGGCTATGAGCCACCAGTCTCTAAGAAAAGGCCAAAGAAGAGTGGTTGTTGCTGGCCTTTATGCTGTTGTTGTTCTTGTGGTGGTGACTCTCAACTCACATTTGATCTTGAAGAGATTGATGAAGAATGGCTTGATGGCTATGAGGAGCAAGAGGAATCATCCTTCATGTCCAAAAAAAAATTTGAGAAACGATTTGGACAGTCACCAGTTTTCATTGCTTCCACTTTGATGGAAGGTGGTGGACTTCCTAAAGGCATCAATTCACGATTACTAATTAAGGAAGCCATTCATGTTATAAGTTGTGGTTATGAAGACAAAACTGAATGGGGCAAAGAGATTGGGTGGATTTATGGCTCAGTCACAGAAGATATCTTAACTGGGTTCAAGATGCATTGCAGTGGATGGAAATCAGTGTACTGCATGCCTAAGAGAGCAGCTTTTAAAGGGTGTGTTCCAATAAATCTATCAGACCGATTGCACCAAGTTCTGAAATGGGCTCTTGGTTCGGTTGAGATTTTCCATAGTGGCCATTGTCCATTATGGTATGGATATAGTGGAAAATTGAAGTGGCTGCAAAGACTGGCTTACATTAATATCATTGTTTACCCATTCACTTCCATCCCTCTACTTGTACACTGTGCAATTCCAACTGTTTGCCTTCTAACTGGAAAGTTCATCATCCCCATTCTGTCAAACCTTGCTAGCATTTGGCTAATGGCTCTATTTATCTCCATAATTTTAGCTTGTGTGCTAGAGCTTAGATGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGAAATTCTAG 2181 0.4191 MAMGRSYIDNKDFEEEKEFYRNAVNLNEKQGKRGLLETKDKRKDDQIKDDDYLLGEARQPLWRKVAVPSSLINPYRIVIILRLIILLFFFQFRITTPVHDAFALWLISVVCEFWLALSWFVDQFPKWFPITRETYLDRLSIRFEREGEPSLLAPLDVFVTTADPLKEPPIITANTVLSVLSVDYPVEKVTCYVSDDSASMLAFDTLAETSEFARIWVPFCKKYNIEPRAPEFYFCQKIDYLKDKVHPTFVKDRRAMKVREYEEFKVKINALVAKAQKKPEEGWVMQDGNPWPGNDSHDHPGMIKEINSLVYGLGFLQVYLGSSGARDKDGKEQPRLVYVSREIRPCYQHNKKAGAMNALLRVSAVLTNAPFVLNLDCDHYTNNSKAIREAMCFLMDPQLGKKLCYVQFPKRFDGVDHHDRYSNHNTIFFDITMKCLDGIQGPVYVGTGCVFNRQALYGYEPPVSKKRPKKSGCCWPLCCCCSCGGDSQLTFDLEEIDEEWLDGYEEQEESSFMSKKKFEKRFGQSPVFIASTLMEGGGLPKGINSRLLIKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCSGWKSVYCMPKRAAFKGCVPINLSDRLHQVLKWALGSVEIFHSGHCPLWYGYSGKLKWLQRLAYINIIVYPFTSIPLLVHCAIPTVCLLTGKFIIPILSNLASIWLMALFISIILACVLELRWSGVSIQDWWRNEKF. 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03644 726 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 58 726 - -
Seca11g03644 726 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 301 460 IPR029044 -
Seca11g03644 726 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 697 IPR029044 -
Seca11g03644 726 Coils Coil 10 30 - -
Seca11g03644 726 Pfam Cellulose synthase 155 726 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03644 Seca-Chr11 91385991 91389935 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03644 49 726 Cell Wall Biosynthesis AT5G17420 67.638 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03644 K10999 - gmx:100777278 1093.57