Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03639 ATGAGTCAAGGACTAATTATTTATCGCCATAATTATTTATCGCCATATTTTCAACACTTAGTATATTCCAATTTTCCTTCTTCTCCAAATCCAACAGTTTTTCTTGGTGTTGTTATACCAGTTTGTGGCCTACTAATTGGGATGATTGGTGTTGGAATCATACTATTCCGAAGAAAAGCCAAACAACTTGATGAAGAGTCCAAAAGCATTGAAAATGATATTCAGTCTATTTGCATGGTATGGGGAAGAGTTGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACAAATGACTTCAATGACAAGTACTGCATCGGAAAAGGAGGATTTGGGAGTGTTTATAAAGCAGAATTACCTACAGGTCTAGTAGTGGCTGTTAAAAGGCTCAACATATCAGACTCAGATGACATTCCAACAGTGAACCGCCAGAGTTTTTTGAATGAGATAAAAACATTGACAGGAGCGAGGCACCGCAATATAATAAAGCTTTATGGTTTCTGTTCTAGAAGGAAACAAATGTTTTTGGTTTATGAATATGTAAACAGAGGAAGTTTAGGAAAGGTGTTGTATGGAGAAGAAGGAAAATTGGAGCTAAGTTGGGCTACAAGGGTGAAAATTGTGCAGGGAATAGTACATGCAATTTCCTACCTGCACAATTTTGGCACAGCAAAGCTGCTAAGTTCCAACACTTCAACCTGGACATCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTCACTGATAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTAGAGATAATGATGGGAAACCACCTTGGAGAACTGTTGGCTACACTGTCTTCAAACAAGTCTTTGTCATCAATAGAGGATTCACAGGTACTTCTGAAGGATGTGCTAGACCAACGCCTTCCACCTCCAACAGGCCAATTAGCTGAAGCAATAGTGTTCACAGTGAGTGTAGCTTTGGCATGCACGCGTGCAGCTCCAGAGTCCAGACCCATGATGCGTTCTGTGGCACAAGAACTATTAGCTACTACACAGGCTTGTCTTTCTGAGCCATTTAGCATGATAACCATAAGCAGTCTTACCGGGTTCCAGAAATAG 1113 0.4079 MSQGLIIYRHNYLSPYFQHLVYSNFPSSPNPTVFLGVVIPVCGLLIGMIGVGIILFRRKAKQLDEESKSIENDIQSICMVWGRVGKFTFSDLVKATNDFNDKYCIGKGGFGSVYKAELPTGLVVAVKRLNISDSDDIPTVNRQSFLNEIKTLTGARHRNIIKLYGFCSRRKQMFLVYEYVNRGSLGKVLYGEEGKLELSWATRVKIVQGIVHAISYLHNFGTAKLLSSNTSTWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVALEIMMGNHLGELLATLSSNKSLSSIEDSQVLLKDVLDQRLPPPTGQLAEAIVFTVSVALACTRAAPESRPMMRSVAQELLATTQACLSEPFSMITISSLTGFQK. 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03639 370 PANTHER LEUCINE RICH REPEAT KINASE 2 36 353 - -
Seca11g03639 370 SUPERFAMILY Protein kinase-like (PK-like) 77 345 IPR011009 -
Seca11g03639 370 Gene3D Transferase(Phosphotransferase) domain 1 180 355 - -
Seca11g03639 370 FunFam Leucine-rich repeat receptor protein kinase MSP1 61 179 - -
Seca11g03639 370 Gene3D Phosphorylase Kinase; domain 1 59 179 - -
Seca11g03639 370 ProSiteProfiles Protein kinase domain profile. 99 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03639 370 Pfam Protein kinase domain 101 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03639 370 Pfam Protein kinase domain 220 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03639 370 ProSitePatterns Protein kinases ATP-binding region signature. 105 127 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03639 Seca-Chr11 91366886 91368330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03639 37 245 Receptor kinase-like Gene Family AT4G08850 40.833 1.18e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca11g03639 Pkinase 9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03639 - - gmx:100786462 519.62