Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03634 ATGAGATATGACAAGACGATAGAGATAACGGGAGTTCTTCTTGGTGTTGTTATACCAGTTTGTGGCCTACTAATTGGGATGATTGGTGTTGGAATCATACTATTCCGAAGAAAAGCCAAACACCTTGATGAAGAGTCCAAAAGCATTGAAAATGATATTCAGTCTATTTGCATGGTATGGGGAAGAGATGGAAAATTCACATTTTCTGATCTTGTTAAGGCCACAAATGACTTCAATGACAAGTACTGCATTGGAAAAGGAGGATTTGGGAGTGTTTATAAAGCAGAATTACCTACAGGTCTAGTAGTGGCTGTTAAAAGGCTCAACATATCAGACTCAGATGACATTCCAACAGTGAACCGCCAGAGTTTTTTGAATGAGATAAAAACATTGACAGGAGCGAGGCACCGCAATATAATAAAGCTTTATGGTTTCTGTTCTAGAAGGAAACAAATGTTTTTGGTTTATGAATATGTAAACAGAGGAAGTTTAGGAAAGGTGATGTATGAAGAAGAAGGAAAATTGGAGCTAAGCTGGGCTACAAGGGTGAAAATTGTGCAGGGAATAGTACATGCAATTTCCTACCTGCACAGTGATTGCTCCCCACCAATTGTGCATAGAGATGTAACACTGAATAACATACTACTGGACTCAGACTTTGAACCACATCTTGAAGATATTGGCACAACAAAGCTGCTAAGTTCCAACACTTCAACCTGGACATCAGTTGCTGGATCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTATGAGGGTCACTGATAAGTGTGACGTCTATAGTTTTGGAGTGGTGGCATTAGAGATAATGATGGGAAACCACCCTGGAGAACTGTTGGCTACACTGTCTTCAAACAAGTCTTTGTCATCAATAGAGGATTCACAGGTTCTTCTGAAGGATGTGCTAGACCAACGCCTTCCACCTCCAACAGGCCAATTAGCTGAAGCAATAGTGTTCACAGTGAGTGTAGCTTTGGCATGCACGCGTGCAGCTCCAGAGTCCAGACCCATGATGCGTTCTGTGGCACAAGAACTATTAGCTGCTACACAGGCTTGTCTTTCTGAGCCATTTAGCATGATAACCATAAGCAGTCTTACCGGGTTCCAGAAATAG 1134 0.4189 MRYDKTIEITGVLLGVVIPVCGLLIGMIGVGIILFRRKAKHLDEESKSIENDIQSICMVWGRDGKFTFSDLVKATNDFNDKYCIGKGGFGSVYKAELPTGLVVAVKRLNISDSDDIPTVNRQSFLNEIKTLTGARHRNIIKLYGFCSRRKQMFLVYEYVNRGSLGKVMYEEEGKLELSWATRVKIVQGIVHAISYLHSDCSPPIVHRDVTLNNILLDSDFEPHLEDIGTTKLLSSNTSTWTSVAGSYGYMAPELAQTMRVTDKCDVYSFGVVALEIMMGNHPGELLATLSSNKSLSSIEDSQVLLKDVLDQRLPPPTGQLAEAIVFTVSVALACTRAAPESRPMMRSVAQELLAATQACLSEPFSMITISSLTGFQK. 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03634 377 ProSiteProfiles Protein kinase domain profile. 78 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03634 377 Gene3D Phosphorylase Kinase; domain 1 38 158 - -
Seca11g03634 377 FunFam Leucine-rich repeat receptor protein kinase MSP1 40 158 - -
Seca11g03634 377 Pfam Protein kinase domain 80 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03634 377 Gene3D Transferase(Phosphotransferase) domain 1 159 363 - -
Seca11g03634 377 ProSitePatterns Tyrosine protein kinases specific active-site signature. 204 216 IPR008266 GO:0004672|GO:0006468
Seca11g03634 377 PANTHER LEUCINE RICH REPEAT KINASE 2 18 360 - -
Seca11g03634 377 FunFam MDIS1-interacting receptor like kinase 2 159 358 - -
Seca11g03634 377 SUPERFAMILY Protein kinase-like (PK-like) 58 352 IPR011009 -
Seca11g03634 377 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03634 Seca-Chr11 91341330 91343295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03634 12 252 Receptor kinase-like Gene Family AT4G08850 45.082 4.51e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca11g03634 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03634 - - gmx:100786462 588.956