Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03594 ATGATGAACGGAAGGAACAGGTTCCCCTTTACTCCATCACAATGGCAAGAGTTTGAACATCAAGCTCTTATCTACAAGTACATGGCTTCAGGTATCTCTATTCCACCTGATCTTCTCTCCACTATTAGAAGAAGCTATTTGGATTCTCCTTTGTCTACTAGGCTTTTGCCTAACCAGCCACAACATTTTGGATGGAACTATCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCAGTTGGATGGAACTATCTTTAG 261 0.4176 MMNGRNRFPFTPSQWQEFEHQALIYKYMASGISIPPDLLSTIRRSYLDSPLSTRLLPNQPQHFGWNYLQMGLGRKIDPEPVGWNYL. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03594 86 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g03594 86 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g03594 86 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca11g03594 86 PANTHER GROWTH-REGULATING FACTOR 5 8 80 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03594 Seca-Chr11 90022563 90023243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03594 7 80 GRF Transcription Factor Family AT3G13960 63.514 8.79e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03594 - - vun:114162468 164.081