Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03565 ATGTTACTTCTTGGCGCATGCACCAAGCCTCCATGCTTGTCAATGGTAACTGAATATATAGAAATGGGATCTTTGTTTTACTTGATTCATGTTAACGGTCAAAAGAAGAAGCTTAGCTGGCGAAGAAGACTAAGGATGTTGGTGATGTGTGCAGGTAAGTATTTTGGTTATTCATACCTTCAGAACATGTTAAAGGGTTGGTTTGAAATTGGTTTTGAGTAG 222 0.3829 MLLLGACTKPPCLSMVTEYIEMGSLFYLIHVNGQKKKLSWRRRLRMLVMCAGKYFGYSYLQNMLKGWFEIGFE. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03565 73 SUPERFAMILY Protein kinase-like (PK-like) 3 48 IPR011009 -
Seca11g03565 73 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03565 Seca-Chr11 89203214 89203435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03565 1 52 MAP Kinase Kinase Kinase AT2G31010 73.585 7.99e-23 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Seca11g03565 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03565 - - gmx:100807193 88.1965