Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03560 ATGTTATTTCTTGGTGCATGCACCAAGCCTCCATGCTTGTCAATGGTAACTGAATATATAGAAATGGGATCTTTGTTTTACTTGATTCATGTTAACGGTCAAAAGAAGAAGCTTAGCTGGCGAAGAAGACTAAGGATGTTGGTGATGTGTGCAGGTAAGTATTTTGGTTATTCATACCTTCAGAACATGTTAAAGGGTTGGTTTGAAATTGGTTTTGAGTAG 222 0.3739 MLFLGACTKPPCLSMVTEYIEMGSLFYLIHVNGQKKKLSWRRRLRMLVMCAGKYFGYSYLQNMLKGWFEIGFE. 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03560 73 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Seca11g03560 73 SUPERFAMILY Protein kinase-like (PK-like) 3 48 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03560 Seca-Chr11 89082801 89083022 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03560 1 52 MAP Kinase Kinase Kinase AT2G31010 75.472 1.17e-23 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Seca11g03560 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03560 - - pvu:PHAVU_011G129600g 90.5077