Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03533 ATGGAATTTAACAAGGACTTTATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACCTAATGGGGATGGAAACCCGGTGGGAGACCAAGCTGGGCTGTCATGGGGCGAGAGGATGATACATGAACTAACACATGATGAAATTAGACGTGATATTGTTAAGTGGTATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAACACTTGCAGAGAAAGGACAGAGTGAGGGAGGCCAGGGCAATTACTCGTGTGCAGTGCACAGCAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCGACGACGATCATAACCATGAGTTAACTCCTCCAACATATGTTCACATGATGTCGGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAGTTGATACCCTGCATGCAGCGGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGACAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGTCATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGTGATGCATTTGCAGCGCTGTGTTATTTGCAGGGAAAGTATAACAGTGATCCACTAATGCATTGCATGTTCAGGACAACAGACGATGGCAGACTGCAGGACCTATTTTGGTGTGACGGTGCAAGTCGTGTTGATTATCAGTGTTTTGGAGATGTAATAGCATTTGACACGACTTATAAGAAGAACAAATATAACAAGCCTTTGTGGGTTCTCGAGACGTTTTTGGAAGCAATGTTTGGCAAAGAGCCCAGTGTCGTAGTCACCGATGGAGATGCAGCCATGCGAGAAGCTATCAGGGTTGTATTCCCAAGTGCAGTTCACTGA 906 0.436 MEFNKDFMDGCSTFWTDENSESNRDESPNGDGNPVGDQAGLSWGERMIHELTHDEIRRDIVKWYLVCNKEGTRDKKHLQRKDRVREARAITRVQCTARMRVYLDMRSGKWKVSAFDDDHNHELTPPTYVHMMSAYRRLSESDKAQVDTLHAAGVRTCHIMSFMIGQKGGHGELGFCKKVMYNHIDKQKRANIEDGDAFAALCYLQGKYNSDPLMHCMFRTTDDGRLQDLFWCDGASRVDYQCFGDVIAFDTTYKKNKYNKPLWVLETFLEAMFGKEPSVVVTDGDAAMREAIRVVFPSAVH. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03533 301 PANTHER OS01G0519700 PROTEIN 61 301 - -
Seca11g03533 301 MobiDBLite consensus disorder prediction 17 40 - -
Seca11g03533 301 Pfam FAR1 DNA-binding domain 55 124 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03533 Seca-Chr11 88796597 88797675 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca11g03533 FAR1 6.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03533 - - ccaj:109792835 296.204