Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03524 ATGGCAGGTAGGAGAAAGAGGGCTACAACTTTCTGGAGGGCAAAAACAAAGAATAGCAATAGCAAGAGCAATGCTAAAAACCCAGCAATTCTTCTCCTAGATGAGGCAACAAGTGCATTAGACTCAGAATCAGAAAAACTGGTGCAAGAAGGCCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTGATTGCTCATCGCCTCTCTACTATTTGCAAAGCTGATCTTGTAGTTGTACTTCAACAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCTTTTCTAGAGAGAGAAATGTATTTGACACAGTGCAACTGAAAGAGTGGCTATTTGATTACAGCTTATCAAATTGGAGTTGA 363 0.4077 MAGRRKRATTFWRAKTKNSNSKSNAKNPAILLLDEATSALDSESEKLVQEGLDRFMIGRTTLVIAHRLSTICKADLVVVLQQGSVSEIGTHDELFSRERNVFDTVQLKEWLFDYSLSNWS. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03524 120 PANTHER ABC TRANSPORTER B FAMILY 26 112 IPR039421 -
Seca11g03524 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 100 IPR027417 -
Seca11g03524 120 Gene3D - 26 108 IPR027417 -
Seca11g03524 120 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03524 Seca-Chr11 88653839 88654201 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03524 30 95 Calmodulin-binding Proteins AT2G36910 57.576 1.33e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03524 K05658 - gmx:100806508 134.42