Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03523 ATGGGTGCTGGAGGTCCTGATGATAAGGACAACAGGTGGCCGCCATGGCTGAAGCCTCTGCTCAAAGAGCGCTTTTTTGTTCAATGCAAGTTCCACGCTGATTCACACAAGAGCGAGTGCAATATGTATTGCTTGGATTGTATGAACGGTGCTCTCTGCTCTCTCTGTCTCGCTTACCACAAAGATCACCGTGCTATCCAGATAAGGAGGTCATCATACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTATTGGACATCACAGAGGTTCAAACCTACATTATCAACAGTGCAAGGGTCGTGTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGGAAAGGCGTTACCAACACTTGCGAAGTCTGCGAGCGTAGCCTTCTCGATTCCTACCGATTCTGTTCTTTGGGTTGCAAGGTAGTATTTATTTACTCCATTGTTGGAACTTCAAGGAATTTCCAGAAGAAGGCAATAGCGTCAGACTCAGAGGATTCATACAGCAGCAGTAGCAGCCATGGCAGGCTGAAGAACAGCAAGGTGCAGAGCTTCACTCCATCCACACCGCCACCAACTTCTGTTAACTACAGAACTGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTCATGCAATACTAG 654 0.4801 MGAGGPDDKDNRWPPWLKPLLKERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITEVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKVVFIYSIVGTSRNFQKKAIASDSEDSYSSSSSHGRLKNSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVMQY. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03523 217 MobiDBLite consensus disorder prediction 158 194 - -
Seca11g03523 217 MobiDBLite consensus disorder prediction 158 217 - -
Seca11g03523 217 Pfam PLATZ transcription factor 69 140 IPR006734 -
Seca11g03523 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03523 Seca-Chr11 88606497 88608986 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca11g03523 PLATZ 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03523 - - vra:106774881 382.489