Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03483 ATGTTCCGCATATCTCTTGTGTTTTATACCTTTGGATCCTACAGGCACCATAGAGGAGGTAGATGCCAAGCAAAGATTAGCAGAGTTGTAGGAAACAAAGATCTATACTTGGGATCATTTAGTACATTTTTAACTTTTACTTTTGCTAACTTGCTACTTATACTTGAAGGGGAAGCGGCAGAGGCATATGACATTGCGGCCATCAAGTTTTGA 213 0.3944 MFRISLVFYTFGSYRHHRGGRCQAKISRVVGNKDLYLGSFSTFLTFTFANLLLILEGEAAEAYDIAAIKF. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03483 70 Gene3D AP2/ERF domain 11 70 IPR036955 GO:0003700|GO:0006355
Seca11g03483 70 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03483 Seca-Chr11 86240336 86240830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03483 12 70 AP2-EREBP Transcription Factor Family AT1G51190 61.017 3.97e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03483 K09285 - atri:130820242 56.9954