Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03476 ATGGCTGCCAGTTTCTGCTATTCATATATCCTTCCACTCTTCTCGTACTTCCTTTTCTTTACTTTTTTCCCTGTTAATTCAATTTACTTCCAAATTCCAAATTTTAATCCTGGTGATGCTAACATACTCTACCTAGGATCTGCAGCAGCTCGTGAAGGAAGAGTTGAATTTAACATCAATAACGAGTATACGTGCCAAGTTGGAAGGGCCATCTATGCCAAAAGGGTGTTACTTTGGGACTCAGATACTGGTCAACTCACTGACTTCACAACTCATTACACTTTCATTATTGACACTCAAGCTAAATCCCGTTATGGCCATGGGCTTGCCTTCTTCCTTGCTCCGGTTGGATTTGAAATTCCACCCAATTCTGCTGGTGGCTTTCTGGGCCTATTCAACACCACAACTATGCATTCAGCTGACAACCAAATTGTTCACGTGGAGTTCGATTCTTTACCAAATCCTAAATTTGATGAAACGGTGGAGCATGTGGGAATCAACAATAACTCAATTTCTTCATCAGTATGGACACGTTGGAATGGTAGTCTACACAGTAGAGACACTGCTGAGGTATGGATTAGCTACAATTCTACAACCATGAATTTAAGCGTGTCTTGGAATTACCAACGCACCTCTGTTCCTCAAGAAAATACTAGTCTTTCTTATCAAATTGATTTGATGAAGGTCCTCCCTGAATGGGTTACAGTAGGATTTTCTGCTGCAACTGGTGCGAATGGAGAAATCCATAATCTTCTGTCCTGGGAATTCAACTCCACTTTGGACAAAAGTGAAAACAATACAAATAAGACAAGATTAGTTGTTATTTTAACTGTCTGTTGCGGTGTTCTGGTGGTGGTAGCAATTGCAGTATATGCGTTACTTTGGAGGAAGAGAAAGAAGAAAAGCAAAAATGAAGAGACTATGCATTTAGCCTCAATTAACGATGACCTGGAAAGAGGAGCCGGGCCAAGAAGGTTCTCCTACAGAGAGCTTGCTTTGGTTACCAATAACTTCTCCAGCGACAGGAAGTTGGGTCAAGGTGGGTTTGGAGCTTTTTACAGAGGTTACTTTGCTGATTCAGATTTAACAGTTTCTGTGAAGAGAATTTCAAAGGGTTCTAGACAAGGGAAGAAAGAGCATGTAACAGAGGTTAAAGTCATTAGCCAACTGAGACATAGGAATCTTGTGAAACTCTTAGGTTGGTGTCATGACAGAGGTGAGTTTCTACTTGTTTATGAGTTCATGCCAAATGGAAGCCTTGATTCTCATTTATTTGGTAAAAGGACAACACCTGTCCCTTGGAGTGTGAGGCACAAGATAGCTCTCGGATTGGCCTCTGCAGTGCTTTATCTACATGAAGAATGGGAAAGATGTGTGGTGCATAGGGATATCAAATCAAGCAATGTTATGCTGGATTCTAGTTTCAATGTCAAGCTTGGGGATTTTGGGCTGGCTAAGCTCATGGACCATGAATTAGGGCCTCAAACAACAGGGTTGGCTGGAACCTTGGGGTATTTGGCTCCAGAGTATGTGAGTACAGGCAGGGCTAGCAAAGAGTCAGATGTCTACAGCTTTGGGGTAGTTGCTTTGGAGATTACTACTGGAAAAAAAACAGTGGATGTTATGAAGGACAAAGATGGAGAGAAGGGATTGATTGAGTGGGTTTGGGATAATTATGGCAGAGGGGAACTGCTTATGGCGATGGATGAGAATTTGCAGAATGATTTTGATGGGAAACTTGTTGAATGTTTGATGATTGTGGGACTGTGGTGTGCTCATCCTGATGGAAATCACAGACCAACAATAAGACAAGCAATTCAAGTGCTTAATTTTGAGGTTAATCTGCCAAACCTTCCATCAAAGAGGCCTGTTGCAACGTATCTTGCTCCTACACCGTCCGTAAGTTCGAGAGAAGCTTCCATAACCACTAGCCTTCAAATGGGTCGTTGA 1950 0.42 MAASFCYSYILPLFSYFLFFTFFPVNSIYFQIPNFNPGDANILYLGSAAAREGRVEFNINNEYTCQVGRAIYAKRVLLWDSDTGQLTDFTTHYTFIIDTQAKSRYGHGLAFFLAPVGFEIPPNSAGGFLGLFNTTTMHSADNQIVHVEFDSLPNPKFDETVEHVGINNNSISSSVWTRWNGSLHSRDTAEVWISYNSTTMNLSVSWNYQRTSVPQENTSLSYQIDLMKVLPEWVTVGFSAATGANGEIHNLLSWEFNSTLDKSENNTNKTRLVVILTVCCGVLVVVAIAVYALLWRKRKKKSKNEETMHLASINDDLERGAGPRRFSYRELALVTNNFSSDRKLGQGGFGAFYRGYFADSDLTVSVKRISKGSRQGKKEHVTEVKVISQLRHRNLVKLLGWCHDRGEFLLVYEFMPNGSLDSHLFGKRTTPVPWSVRHKIALGLASAVLYLHEEWERCVVHRDIKSSNVMLDSSFNVKLGDFGLAKLMDHELGPQTTGLAGTLGYLAPEYVSTGRASKESDVYSFGVVALEITTGKKTVDVMKDKDGEKGLIEWVWDNYGRGELLMAMDENLQNDFDGKLVECLMIVGLWCAHPDGNHRPTIRQAIQVLNFEVNLPNLPSKRPVATYLAPTPSVSSREASITTSLQMGR. 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03476 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Seca11g03476 649 PANTHER - 59 611 - -
Seca11g03476 649 SUPERFAMILY Protein kinase-like (PK-like) 322 622 IPR011009 -
Seca11g03476 649 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Seca11g03476 649 Pfam Legume lectin domain 29 269 IPR001220 GO:0030246
Seca11g03476 649 ProSiteProfiles Protein kinase domain profile. 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03476 649 CDD STKc_IRAK 344 610 - -
Seca11g03476 649 Gene3D Transferase(Phosphotransferase) domain 1 415 630 - -
Seca11g03476 649 FunFam L-type lectin-domain containing receptor kinase IX.1 323 414 - -
Seca11g03476 649 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Seca11g03476 649 FunFam L-type lectin-domain containing receptor kinase IX.1 26 269 - -
Seca11g03476 649 FunFam Lectin-domain containing receptor kinase A4.3 415 629 - -
Seca11g03476 649 CDD lectin_legume_LecRK_Arcelin_ConA 28 260 IPR001220 GO:0030246
Seca11g03476 649 Gene3D - 25 282 - -
Seca11g03476 649 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03476 649 SMART serkin_6 338 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca11g03476 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 267 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03476 Seca-Chr11 85875075 85877113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03476 13 627 Receptor kinase-like Gene Family AT5G10530 57.692 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca11g03476 Pkinase 4.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03476 - - jre:108982580 842.417