Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03467 ATGGCAGCCACCGTCGTCCTCACCCAATGGCACCCACTGATTGGTTCCTACTTGGCCATAAAGCCAACGCCAACCGCCGCATCCAATGGTGTGTTTCCTTCTCTTAATTTCTCTGTTCTATTTTTAATTTCAATTCCATTCTTGTTTGGATTTCTCTGTTCATGTGTATTTCCATCTCTGTATTTTGGCTTGGGAAATGTCTTTGGCTTGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAGGATTTGTCAGTGTGCTCTCAATTCATGTTGGTGGCTCACTGCTTGGTTTCAAATGTCTCTAAGTTGTGAAAGTCTATATATGCTTGGTTTGGTGAGAAAAAGCATGGAAGTTTACTACTATTGGTATATTATGATAGTGATCAGGCTCTCAGCAGATGTTGCATCTGTGCGTGCCCTTGTTGGTGATGCACTGGGACTTTTGATTCAAAACATAGCAACATCATTGACAGGGATTCAGGATGCAAAGAAGATGTATGAAGATGCAGTGGGAAGCATAAGAATGGTGGCTTCTTTCTGTGAAGAAGAGAAAGTTATGGACTTGTACAGGATGAAATGTGAAGGTCCTGTGAAAATAGGGATACGACAAGGCTTGATAAGTGAAACTTGA 651 0.4224 MAATVVLTQWHPLIGSYLAIKPTPTAASNGVFPSLNFSVLFLISIPFLFGFLCSCVFPSLYFGLGNVFGLGNGTAKGGSPKARLATYRICQCALNSCWWLTAWFQMSLSCESLYMLGLVRKSMEVYYYWYIMIVIRLSADVASVRALVGDALGLLIQNIATSLTGIQDAKKMYEDAVGSIRMVASFCEEEKVMDLYRMKCEGPVKIGIRQGLISET. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03467 216 Gene3D ABC transporter type 1, transmembrane domain 14 216 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03467 Seca-Chr11 85326477 85329250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03467 65 90 Subtilisin-like Serine Gene Family AT5G59810 73.077 8.30e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03467 K05658 - gmx:100802547 106.301