Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03447 ATGAGTGCCACAAACTATAGGCATGAAATTGTAGGTGAAGTAACAGAGGTAGGAAGCAAGGTACAAAAGTTCAAAGTTGGAGACAAGGTGGGTGTGGGATGCATGGTTCAATCCTGCCACTCATGCCAAAGTTGTGCTGATAATCTTGAGAATTATTGTCCAAAAATGATTCTCACATATGGTGCCAAGGATGATGATGGCACCACCACATATGGAGGGTATTCTGACTTTATGGTTGCAGATGAACGCTTTGTGATCCGTATTCCAGATGGCCTACCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCATTAAGATATTTTGGGCTTGACAAGCCCGGCCTGCAATTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATATGGCTGTGAAGTTTGCTAAAGCGTTTGGGGCTAAGGTAACAGTAATTAGCACATCTCCTAACAAAAAGAAAGAAGCCATTGAACATCTTGGAGCTGACTCATTTGTGGTTAGCAATGAGCAAGATCAAATGCAGGCTGTAATGGGCACCTTAGATGGTATCATTGACACAGTTTCTGCCGTCCATCCCCTGTTTCCTTTGATTGCTCTGTTGAAGTCTCATGGGAAACTTGTCATGGTGGGTGCACCAGAGAAGCCTCTGGAGCTACCAGTATTCCCTTTACTTTTGGGGAGAAAGATAGTAGCTGGAAGTTGCATTGGAGGAATTAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACATAATGTGAAACCTGACATTGAGGTTATTCCTATAGATTATGTGAACACCGCAATGGAGCGCCTCCTCAAAGCAGATGTAAAATATCGATTTGTTATTGATATTGGGAACACGCTAAAGCCAAGCTCTTAA 894 0.4374 MSATNYRHEIVGEVTEVGSKVQKFKVGDKVGVGCMVQSCHSCQSCADNLENYCPKMILTYGAKDDDGTTTYGGYSDFMVADERFVIRIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGLQLGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVVSNEQDQMQAVMGTLDGIIDTVSAVHPLFPLIALLKSHGKLVMVGAPEKPLELPVFPLLLGRKIVAGSCIGGIKETQEMIDFAAKHNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03447 297 FunFam Cinnamyl alcohol dehydrogenase 103 259 - -
Seca11g03447 297 SUPERFAMILY GroES-like 8 120 IPR011032 -
Seca11g03447 297 Gene3D - 7 289 - -
Seca11g03447 297 Pfam Alcohol dehydrogenase GroES-like domain 8 87 IPR013154 -
Seca11g03447 297 Gene3D - 103 259 - -
Seca11g03447 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 258 IPR036291 -
Seca11g03447 297 CDD CAD1 8 288 IPR047109 GO:0016616
Seca11g03447 297 Pfam Zinc-binding dehydrogenase 130 253 IPR013149 -
Seca11g03447 297 PANTHER ALDEHYDE REDUCTASE 7 292 IPR047109 GO:0016616
Seca11g03447 297 FunFam Putative cinnamyl alcohol dehydrogenase 6 260 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03447 Seca-Chr11 83897663 83901187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03447 8 296 Monolignol Biosynthesis Gene Families AT4G37990 72.318 1.60e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03447 K23232 - gmx:100809071 479.174