Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03431 ATGGGCGACGAAAATTTTTCAAGAAGAAGAAAGGAAGTTGTTGGAGAGGAATCTCCATTGCTACCCAAGAATGGAAATGGGGCATCCTTTACTGGGTCTGTCTTCAATTTGTCAACCACCATCATTGGTGCTGGGATCATGGCCTTACCTGCAGCCATGAAAGTTCTTGGTCTGGTTATGGGTATTGCTGCCATCATCTTCCTTGCTTTGCTCACAGAGACCTCTTTGGACATTCTTATGAGATTTAGCAGAGTTGGCAAGGCTGGGACCTACGGGGAGGTCATGGGGCATGCTTTTGGAAGTCTTGGACGATTCGTGCTTCAGATATCTGTTCTTATCAACAACTTTGGGATACTTGTTGTCTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCAAGTGGAATTCATCATTTGGGTGTACTGGAAGGATGGTTTGGTGAACACTGGTGGACTGGGCGTACTTTTGTTCTTCTTGTTGCAACCCTTTTGGTATTTGCTCCATTGGGATTCTTTAAGAGGATAGATTCATTAAGATATACTTCTGCTTTAGCAGTGGCTCTGGCAATGGTGTTTCTTGTCATAACTGCAGGAATCACATTTACTAAACTGTTTGATGGCAGTATTGCAAGTCCCAGGTTACTTCCTAATATTACTGATATTACATCCATATGGAATCTCTTTACAGCAGTTCCGGTTCTTGTCACAGCATTTGTTTGTCATTATAATGTGCATACAATAGAGAATGAGCTAGGAGACTCTTCCTCAATACAACCAGTTGTATGTGCATCACTGGTTCTATGTTCTGTTATCTATATTCTTACAGCCTTGTTTGGATTTCTCCTATTTGGTGAGTCCACCCTTGATGATGTGCTTGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAGTGTGCTCAATGACATTGTTCGTATCAGCTATGCCTTCCACCTCATGCTTGTTTTTCCAGTTATCTTCTTTTCGCTGCGCTTCAATTTGGATGATCTTATCTTTCCTTCAGCCAGGTCATTGAATTTAGATAAGTGTAGGTTTGTCTTCATCACCACTGGACTCATTTCTCTGCTCTATGTGGCTGCGAATTTTATTCCTAGCATCTGGATTGTTTTCCAATTCACTGGAGCAACTGCCACTGTTTGCCTTGGCTTTGTTTTCCCTGCTGCAATTGCTCTAAGGTTGGTTTTCTTTCTTTATCTAAATCTTAGTTTAGTAGCGATCACATTATGTTCCTTTTCATTATTTTTTAATAAATTTCATCTTCACTCTTATTGA 1299 0.408 MGDENFSRRRKEVVGEESPLLPKNGNGASFTGSVFNLSTTIIGAGIMALPAAMKVLGLVMGIAAIIFLALLTETSLDILMRFSRVGKAGTYGEVMGHAFGSLGRFVLQISVLINNFGILVVYMIIIGDVLSGTSSSGIHHLGVLEGWFGEHWWTGRTFVLLVATLLVFAPLGFFKRIDSLRYTSALAVALAMVFLVITAGITFTKLFDGSIASPRLLPNITDITSIWNLFTAVPVLVTAFVCHYNVHTIENELGDSSSIQPVVCASLVLCSVIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSVLNDIVRISYAFHLMLVFPVIFFSLRFNLDDLIFPSARSLNLDKCRFVFITTGLISLLYVAANFIPSIWIVFQFTGATATVCLGFVFPAAIALRLVFFLYLNLSLVAITLCSFSLFFNKFHLHSY. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03431 432 Pfam Transmembrane amino acid transporter protein 28 402 IPR013057 -
Seca11g03431 432 MobiDBLite consensus disorder prediction 1 20 - -
Seca11g03431 432 MobiDBLite consensus disorder prediction 1 17 - -
Seca11g03431 432 PANTHER AMINO ACID TRANSPORTER 25 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03431 Seca-Chr11 82008172 82010094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03431 8 401 Amino Acid or Auxin Permease AAAP Family AT3G30390 63.457 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03431 K14207 - gmx:100778699 616.305