Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03410 ATGTCTCTCTGTGCTGCACTCTCCTCCACAACTTCCCACCTCACCACCATCCTTCCATCTCTCCCTTCCACCTCTTCACTTTCTCGCAGATTTTCCTTCACTTTCCGGGAAAACAGAAACCCAATCCTCTCCCTTCACCGGCACTCGTTTTCAGCAAGGCCTACCAGAGTCTTGGTAAAGTCTCAGGCTACTGCACCTGCTTCTTCTGAGGCTGTCAAAGTGACACCTGTTCCTTCTGACATGAAAGCCTGGGTCTATGGGGAATATGGCGGTGTGGATGTTTTGAAGTTTGACTCCAATGTTGCTGTGCCTGATGTGAAGGAAGATCAGGTTCTTGTCAGAGTTTTTGCTGCAGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCAGGCTATGACGTTGCCGGTGTGGTAGTGAAGGTTGGTAGTCAAGTAAAGGACTTCAAAGTGGGTGATGAAGTATATGGGAATGTAAACGAGAAAGCACTAGAAGGGCCTAAGCAGTTTGGGTCTCTGGCTGAGTACACAGCTGTTGAGGACAAATTGTTGGCACCAAAACCTAAGAATTTGGACTTTGCTCAAGCTGCTGGTCTTCCTCTAGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCATCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCCAGCACTAGAAATTTGGAGCTGTTGAAAAGCCTGGGAGCTGATTTGGCTATTGACTACACAAAGGACAATTTTGAAGACTTACCAGAAAAATTTGATGTAGTTTATGATGCCATCGGGCAATGTGACAGGGCAGTGAAGGCTATCAAAGAAGGTGGCAGTGTGGTAGCACTCACAGGTGCTGTTACACCACCTGGCTTCAGATTTGTAGTAACTTCCAATGGAGCTGTTCTGAGGAAATTAAACCCTTATTTAGAGAGTGGAAAAGTGAAGCCAATTGTAGACCCCAAAGGTCCATTCCCCTTTTCCCAGCTTGCTGAAGCCTTTTCTTACCTTGAAACAAACCGAGCTACCGGAAAGGTTGTTATACATCCCATCTCATGA 1170 0.4624 MSLCAALSSTTSHLTTILPSLPSTSSLSRRFSFTFRENRNPILSLHRHSFSARPTRVLVKSQATAPASSEAVKVTPVPSDMKAWVYGEYGGVDVLKFDSNVAVPDVKEDQVLVRVFAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGNVNEKALEGPKQFGSLAEYTAVEDKLLAPKPKNLDFAQAAGLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKDNFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPIVDPKGPFPFSQLAEAFSYLETNRATGKVVIHPIS. 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03410 389 Gene3D - 88 385 - -
Seca11g03410 389 CDD MDR_like_2 81 385 - -
Seca11g03410 389 SUPERFAMILY GroES-like 79 235 IPR011032 -
Seca11g03410 389 Pfam Alcohol dehydrogenase GroES-like domain 109 172 IPR013154 -
Seca11g03410 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 203 326 IPR036291 -
Seca11g03410 389 ProSiteProfiles Pterin-binding domain profile. 271 389 IPR000489 GO:0042558
Seca11g03410 389 Pfam Zinc-binding dehydrogenase 274 385 - -
Seca11g03410 389 Gene3D - 222 336 - -
Seca11g03410 389 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 72 388 IPR044626 GO:0016628
Seca11g03410 389 SMART PKS_ER_names_mod 90 385 IPR020843 GO:0016491
Seca11g03410 389 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 230 251 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03410 Seca-Chr11 81002328 81005786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03410 105 311 Monolignol Biosynthesis Gene Families AT4G39330 25.322 7.45e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03410 K18980 - gmx:100810816 614.379