Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03400 ATGTGGTATCATGCCTGTAAGATTTCGAATAAAAAAGTTACTGAAAACATTGGTGCTTGTTACTGGTGCAAAGGTTTCCAGAAAAATGATGAACAATGCAGCTGTCAATATATCATGGTTGTAAGAGTTTTTTATGCAAGTGGTGAGGCTTATATCTCAGTTTAA 165 0.3455 MWYHACKISNKKVTENIGACYWCKGFQKNDEQCSCQYIMVVRVFYASGEAYISV. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03400 54 Pfam Replication factor-A C terminal domain 1 54 IPR013955 -
Seca11g03400 54 SUPERFAMILY Nucleic acid-binding proteins 1 54 IPR012340 -
Seca11g03400 54 Gene3D - 1 54 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03400 Seca-Chr11 80439639 80439874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03400 1 53 Core DNA Replication Machinery Family AT5G61000 56.604 9.01e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03400 K07466 - mnt:21390529 86.2705