Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03399 ATGGGAGGCTTGATAGTTTCGCCGCCACCGCGTTTCGCCGGATTTTCGGCGGGGGTGGAGGAGTTGCAGAAGAGGAGGAAGAGAAGAAAGGAGGTTGAGGAAGGGTTGAATTATGACTCTGATGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATTGGGGCAACAATTTCAACGCAAATAACAATAACAATGATAATGAGAATGGTGTCACTGATGGAAAGAAGAAGGGGAAGAAGAAGGGGATGCCAATGAAGAATCTCATGGATGAGAGAAGGCGTAGGAAGAAAATCAATCATAGTTTGTACATGTTTCGCTCTGTTGTATCGTAG 330 0.4485 MGGLIVSPPPRFAGFSAGVEELQKRRKRRKEVEEGLNYDSDEVIEIGKLEENWGNNFNANNNNNDNENGVTDGKKKGKKKGMPMKNLMDERRRRKKINHSLYMFRSVVS. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03399 109 MobiDBLite consensus disorder prediction 57 95 - -
Seca11g03399 109 MobiDBLite consensus disorder prediction 69 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03399 Seca-Chr11 80299988 80300317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03399 35 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 52.703 2.45e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03399 - - pvu:PHAVU_004G070200g 75.485