Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03393 ATGTATTTCTTTGGGAAGCCTGCGTTATTTAGAATTAGAGGATATATAAGTTCCATAAGGCCGAACCAGGCTATGTGGTATCATGCCTGTAAGATTTCGAATAAAAAAGTTACTGAAAACATTGGTGCTTGTTACTGGTGCGAAGGTTGCCAGAAAAATGATGAACAATGCAACTTCAGGTATATCATGGTTGTAAGAGTTTTTTATGCAAGTGGTAGGCTCATATCTCAGTCTTTAATAAGGGAAAGCTAA 252 0.369 MYFFGKPALFRIRGYISSIRPNQAMWYHACKISNKKVTENIGACYWCEGCQKNDEQCNFRYIMVVRVFYASGRLISQSLIRES. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03393 83 SUPERFAMILY Nucleic acid-binding proteins 5 72 IPR012340 -
Seca11g03393 83 Pfam Replication factor-A C terminal domain 10 74 IPR013955 -
Seca11g03393 83 Gene3D - 3 79 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03393 Seca-Chr11 79918688 79919010 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03393 3 72 Core DNA Replication Machinery Family AT5G61000 57.143 7.61e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03393 K07466 - mnt:21390529 112.079