Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03376 ATGGCCGTTAGAGATGTTGTGTCTGTGGTCAAGTATTCTCTCCCGTGTTTTATAATTTCAAACCTTCCTTTAATTTTACTCCTATTGAGTGTTGATGATAACGATGAAGGTGGGACATTTGCTCTCTATTCGCTTCTCTATAGGCATGCCAAGTTTAATTTACTCCCCAATCAACAAGCACCTGACGAGGAGCTGTCGTCCTACAAATATGGTCCCTCATCACAGATTGCAGCCTCATCTTCACTGAAAAGGTTTTTGGAGAAACATAAAAGGTTAAGAACAACCCTGCTTGTTGTGGTATTGTTTGGTGCTTGCATGGTCATAGGTGATGGAGTGCTTTCTCCAGCAATTTCAGTTCTAGCATCGGTATCAGGAATACAGGTTACAGAAACAAAATTCACAAATGGTGAACTTGTCCTGTTGACCTGTGTCATATTGATTGGCCAGTTTACTATCCAACATTGTGGCACACAGAAAGTTGCATTTATGTTTGCGGCAATTATAATCATATGGCTTGTATCCATTTTTTCTGTTGGGCTCTATAACAAGATATATTGGAATCCAAAAATAGTCTGGGCTGTCTCCCCACACTATATCATCAAGTTCTTTATCAAGACTAGCAAAGAAGGTTAG 633 0.3981 MAVRDVVSVVKYSLPCFIISNLPLILLLLSVDDNDEGGTFALYSLLYRHAKFNLLPNQQAPDEELSSYKYGPSSQIAASSSLKRFLEKHKRLRTTLLVVVLFGACMVIGDGVLSPAISVLASVSGIQVTETKFTNGELVLLTCVILIGQFTIQHCGTQKVAFMFAAIIIIWLVSIFSVGLYNKIYWNPKIVWAVSPHYIIKFFIKTSKEG. 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03376 210 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 210 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca11g03376 210 Pfam K+ potassium transporter 5 209 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03376 Seca-Chr11 79058716 79059348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03376 30 210 Inorganic Solute Cotransporters AT3G02050 70.166 8.81e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03376 K03549 - gmx:100776888 296.204