Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca11g03300 | ATGAGGGGTGGTAGGAAAAGGAAGCTGCATTTAAGCAAGATCTACTCATTCACATGCTGCAAGGCATCTTTCAAAGGAGAACATTCACAGATTGGAGGTAAAGGTTATTCCAGGGTGGTCTTCTGCAATGAGCCAGATAACTTTGAGGCTGGGATTAGGAATTATGCAGATAATTCTGTCAGATCTACAAAATATACTGCTGCTACTTTCCTTCCTAAATCACTGTTTGAGCAGTTTAGGAGGGTGGCCAACTTCTATTTTTTGGTTACTGGTATTTTGGCCTTCACAAAACTTGCTCCATATAAAGCTGTCAGTGCTATCCTCCCCCTGATTATTGTTATTGGGGCAACTATTGTGAAAGAAGGTATTGAAGACTGGCGTAGGAAAAAGCAGGATATTGAGGTGAACAATAGAAGAGCTAAAGTGCATAAAGTTGATGGCACTTTTGAATATACTGCATGGAAAAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCAGCAGATCTCCTATTGCTTTCATCCAGTTATGAGGATGCAGTCTGCTATGTTGAGACCACGAACTTGGATGGGGAGACAAATTTAAAGTTAAAACAAGGTTTGGAGGTAACTTCATCCTTAAATGAGGATCTCAACTTCCGAAATTTTAGAGCTATAGTCAAATGTGAAGACCCAAATGCAAGTTTGTACTCATTTGTTGGGAGCATGGAGTTTGAAGAGCAAAAGTATGCCCTTTCTCCTCAACAACTTCTTCTGCGTGACTCAAAACTTCGTAACACAGATTACATTTTTGGAGCTGTCATCTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAGAGAAGCAGAATTGAGAAAAAGATGGATAGAATCATCTACTTCTTGTTTTGTATTTTATTTCTTATGGCATTTGTTGGATCTATTTTCTTTGGTGTTTCAACTAAAGATGACTTCGAAAATGGTTTGGTGAAAAGATGGTATTTAAGACCAGATGATTCTACAATCTTCTATGATCCGAAAAGATCAGCTGCTGCTGCTATGTTTCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAAAGCATTTTCATCAATCAAGATATCTATATGTACTACAAGGAAGCAGACAAACCAGCCCATGCTCGCACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGACACAATACTTTCTGATAAAACTGGAACTCTGACTTGCAACTCAATGGAGTTTATCAAATGTTCTATCGCTGGGGTAGCTTATGGCCGTGGTGTTACAGAGGTTGAGAAGACCATGCATAGAAGAAAAGGCTCATCATTTGTTCATGAGCATGATATATCAGAAGAAGATGACATCAGGGATTCTCTTGATAAAAAAGCACTAATTAAAGGTTTTAACTTCACTGATGAAAGAATAACAAATGGAAATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCGCCTATTAGCAGTATGTCATACAGCCATACCAGAAGTGGATAATGACACAGGAAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCCGCGAGAGAACTTGGTTTTGAATTCTGCAAAAGGGCTCAGACTAGTTTATCAACATGTGAGTTGGATCCAGTATCTGGCAAGAAAGTTGAAAGGATGTACAAGCTTCTCAATGTACTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCAGGTCTTAGAACCCTTATACTGGCCTATCGTGAGCTTGATGCAGAAGAATACAAGGAGTTTGATAATAGATTCTCTAAGGCCAAGAATTTAGTTAGTGCAAATCAGGAAGCACTGATTGAGGAGGTATCAGATAGTATTGAGAAAAATCTAATCCTTCTAGGTGCCACTGCTGTAGAAGACAAGCTCCAAAGTGGGGTTCCTGATTGCATTGACAAGCTTGCACAAGCAGGAATTAAGATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATGTTGGATTTGCTTGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGGGACAAGATAGCTATTACCAAGGCATCAAGGCAAAGTGTCCTCCTTCAGATATCTGAAGGTGCGGCACAGCTTGCTGCATACAGAGGGAGCTCTAAGCAGGCATTTGCTCTGATTGTTGATGGAAAATCACTTGTTTATGCACTAGAAGATAATATGAAGAACATGTTTCTGGAGCTTGCAATTCGTTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAGGCACTGGTAACTAGATTGGTCAAGTCTGGAACTAGGAAAACAACATTAGCTATTGGAGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGTGTTGGGATAAGTGGTGTGGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGATATTTGGAACGATTACTTTTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATGTCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCCGGAGTACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCGTCACTTCCCGTGATTGCTCTTGGGGTATTTGACCAGGATGTATCTGCTCGGTACTGCTTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTCCTTTTCAGCTGGCGCCGAATTCTCAGCTGGATGCTTAATGGATTTATTAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCAATAGAGCTCCAAGCCTTTGATGAGGAAGGTAGAACAGCTGGGAGGGATATACTGGGAGCAACCATCTATACTTGTATAGTTTGGGTTGTAAACTTGCAGATGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTGCTTTCTGGTACATTTTTCTCCTGATATATGGAGCAATGCCTCCAAATCTATCTGAAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCTTCCCCCTCCTATTGGATCGTCACATTCTTTGTGGTGATCACAACCCTTATACCATACTTCTCATACTCAGCAATAAAGATGAGGTTCTTTCCCATGTATCATGAAGTGGTACAGTGGATAAGGTATGAGGGGAAGACTAAGGATCCTGAGTTCTGTGAAATGGTGCAGCAGAGGTCATTGCAGCTTATGACTGTTGGTTCATCAGCACGCTTAGCAGCCAAGGCAAACCAATTTAGATAA | 3576 | 0.401 | MRGGRKRKLHLSKIYSFTCCKASFKGEHSQIGGKGYSRVVFCNEPDNFEAGIRNYADNSVRSTKYTAATFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYKAVSAILPLIIVIGATIVKEGIEDWRRKKQDIEVNNRRAKVHKVDGTFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETTNLDGETNLKLKQGLEVTSSLNEDLNFRNFRAIVKCEDPNASLYSFVGSMEFEEQKYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRIIYFLFCILFLMAFVGSIFFGVSTKDDFENGLVKRWYLRPDDSTIFYDPKRSAAAAMFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIYMYYKEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKTMHRRKGSSFVHEHDISEEDDIRDSLDKKALIKGFNFTDERITNGNWVNEPHADVIQKFFRLLAVCHTAIPEVDNDTGNVSYEAESPDEAAFVIAARELGFEFCKRAQTSLSTCELDPVSGKKVERMYKLLNVLEFNSSRKRMSVIVEDEEGKILLLCKGADSVMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNRFSKAKNLVSANQEALIEEVSDSIEKNLILLGATAVEDKLQSGVPDCIDKLAQAGIKIWVLTGDKMETAINVGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKIAITKASRQSVLLQISEGAAQLAAYRGSSKQAFALIVDGKSLVYALEDNMKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNVTFGFTLFLYEVYASFSGVPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAIELQAFDEEGRTAGRDILGATIYTCIVWVVNLQMALAISYFTMIQHFFIWGSIAFWYIFLLIYGAMPPNLSENAYKVFIETLAPSPSYWIVTFFVVITTLIPYFSYSAIKMRFFPMYHEVVQWIRYEGKTKDPEFCEMVQQRSLQLMTVGSSARLAAKANQFR. | 1192 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca11g03300 | 1191 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 39 | 1154 | - | - | |
| Seca11g03300 | 1191 | Gene3D | - | 547 | 700 | IPR023299 | GO:0000166 | |
| Seca11g03300 | 1191 | NCBIfam | HAD-IC family P-type ATPase | 836 | 948 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Seca11g03300 | 1191 | NCBIfam | phospholipid-translocating P-type ATPase | 55 | 1150 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
| Seca11g03300 | 1191 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 431 | 702 | IPR023299 | GO:0000166 | |
| Seca11g03300 | 1191 | SUPERFAMILY | HAD-like | 419 | 920 | IPR036412 | - | |
| Seca11g03300 | 1191 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1025 | - | - | |
| Seca11g03300 | 1191 | FunFam | Phospholipid-transporting ATPase | 700 | 905 | - | - | |
| Seca11g03300 | 1191 | Gene3D | - | 117 | 286 | - | - | |
| Seca11g03300 | 1191 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 106 | IPR032631 | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca11g03300 | K01530 | - | gmx:100781421 | 2119.35 |
Showing 1 to 1 of 1 entries