Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03293 ATGCAGGCGGAGGTACAAAACTCACTTGAAAACTCACTTGATTCGAATACTCAGCTTCATCCAGAGACCGTTGTTTCGGTTCAAAATGGGGATCCTGGTGTTTCCTCATCTGTTGCAAATGTTGTCATACCTCAGCAGCCAGCTCCGAAGAAACCGACAAGGCAGTGGGCTGCTTGGACTCGTCAAGAGGAGGAAAGCTTCTTCACTGCATTAAGACAAGTTGGGAAGAATTTTGAGAAAATTACTTGCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGGCTTGTGAGACGGATGAACAAACTTCTTGGCCCAGGATTATGTTTGGATGCCAAAAACTCAAAAGATACTAATGCTGCAATGCTTCGTTGGTAA 390 0.441 MQAEVQNSLENSLDSNTQLHPETVVSVQNGDPGVSSSVANVVIPQQPAPKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITCRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRW. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03293 129 SMART sant 55 103 IPR001005 -
Seca11g03293 129 FunFam TSL-kinase interacting protein 1 20 108 - -
Seca11g03293 129 PANTHER CRAMPED PROTEIN 40 129 - -
Seca11g03293 129 Gene3D - 1 108 - -
Seca11g03293 129 FunFam TSL-kinase interacting protein 1 59 120 - -
Seca11g03293 129 MobiDBLite consensus disorder prediction 1 32 - -
Seca11g03293 129 SUPERFAMILY Homeodomain-like 50 105 IPR009057 -
Seca11g03293 129 Pfam Myb-like DNA-binding domain 58 100 IPR001005 -
Seca11g03293 129 ProSiteProfiles SANT domain profile. 59 105 IPR017884 -
Seca11g03293 129 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Seca11g03293 129 CDD SANT 58 101 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca11g03293 Myb_DNA-binding 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03293 - - gmx:100798411 226.483