Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03280 ATGGATGAAGAAAACGAGAAGGCCATTGAGGAGCACCTGAGCAAAATTCCCGGTGACGCCAACGTTATTCGATCACTCGTTGAGGTTAAGGTCAGCGCTCGGGAAATCGACGAAGCGATTCAACTCTTGGACCGTTTGATTGAGCTTCATCCTGAAGAGTTCGAGTGGCCGCTGCTGAAGGTGGACTTGTATGGTCACAATGGTGAACACGAATTGGCAAGGAACGGGTTCGAAGATTTGCTGAAGAAAGATCCATTGTTCACGGAAGCTTATCACAGAAGTGCAGCTGACCTGTTTGATGTATTGCCTCAAAGGAATATACATAAACTGTTTGATGCAATATCTGAAAGAGGTGAGCCAAAGTTGTTTGCTGAAATGCCAAAAAGGGATGTGCTGAATCTATTTGCTATAATGCTAACACACTTGAAGGGAATGGAAGTTGCCAAAAAGGCTGGGTGCTTACTCTCCTATGATCTAAACTCGCGCCTACCCTTGTGGCCAGCTCGTCAGCAAATTCTTGGTACTTGGAAAAGCGTTGAGTTGGTCAAGGTCTATTGGCCTCCAATTATTTGTGATAAGTGCTTTGATGCATACATACTTGCAGGTTTTGATATGGTTATACATGATGGGGTTGGTGTGTTGTTTGTGTCTCTTAATGGCTCTGCCTCTACATCTTTCAATAATAGTGTTTCCATTGGTTCCTTCCATGCTTCTAAGAAAAGGATTGTGGTTGTTTTCTCTGCTGGCATTGGCAATAGTAGACCTGCTGTGGGATTGTGGTTGTTTGCTTTGCTGAATAACAAGCTTGAAGGATGCAATGACTCAACTGTTTTCTTTTCTTTTTTAGTTGAATCCCTTTTTTGA 864 0.4306 MDEENEKAIEEHLSKIPGDANVIRSLVEVKVSAREIDEAIQLLDRLIELHPEEFEWPLLKVDLYGHNGEHELARNGFEDLLKKDPLFTEAYHRSAADLFDVLPQRNIHKLFDAISERGEPKLFAEMPKRDVLNLFAIMLTHLKGMEVAKKAGCLLSYDLNSRLPLWPARQQILGTWKSVELVKVYWPPIICDKCFDAYILAGFDMVIHDGVGVLFVSLNGSASTSFNNSVSIGSFHASKKRIVVVFSAGIGNSRPAVGLWLFALLNNKLEGCNDSTVFFSFLVESLF. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03280 287 Gene3D Tetratricopeptide repeat domain 3 125 IPR011990 GO:0005515
Seca11g03280 287 SUPERFAMILY Subtilisin-like 183 249 IPR036852 GO:0004252|GO:0006508
Seca11g03280 287 Gene3D Peptidase S8/S53 domain 183 255 IPR036852 GO:0004252|GO:0006508
Seca11g03280 287 ProSiteProfiles TPR repeat profile. 20 53 IPR019734 GO:0005515
Seca11g03280 287 SUPERFAMILY TPR-like 8 96 IPR011990 GO:0005515
Seca11g03280 287 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 183 255 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03280 Seca-Chr11 73835743 73836606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03280 179 256 Subtilisin-like Serine Gene Family AT2G04160 58.974 4.27e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03280 - - sind:105174402 119.398