Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03240 ATGGGTAGCAGTGACGTTGAGAAAACCCTAAAAGAGAAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCTTCAACACCTGTCACCGGAACAGTTAATCCTGACTGGACTAACTTTCAGGCATATTCTCCTATACCTCCACATGGGTTCTTGGCATCAAGTCCCCAAGCCCATCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATTCCTCCGGGGTCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCGAATGGTATTGCAGATGCTTCGGGAAATACTCCAGGCAACATTGAAGCTGAAGCTAAGCCTCCTGAAGTCAAGGAAAAATTACCAATCAAAAGATCAAAAGGAAGTTTGTGTAGTTTAAATATGAGTACTGGAAAAAATAATGAACTTGGTAAAACACCAGCGACATCTGCTAATGGGATTCATTCTAAAAGCGGTGAGAGTGATAGTGAAGGTACTAGTGAAGGAAGTGATGAAAATTCCCAGAATGACTCTCAATTGAAATCCGGAGAGAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCAATGCATGCTCCTCAAAATGGGGTACTTAATACACCTCATACAGTTGTTAACCAAACTATGCCTATCGTACCTATTTCTGCTGCTGGTCCTCTCACAGCAGTTCCTGGTCCCACAACTAATTTAAATATAGGAATGGATTATTGGGGCACACCAACTTCATCCACCATTCCTGTGCTGCGTGGAAAGGTTCCTCCTGCAGTTGCTGGAGGGATGGTTAATGCTGGGTCACGAGATAGTGCTCAGTCACAACTTTGGCTGCAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGCAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAACTTGCCCAACGAGCTGAGGCTTTGAAAGAAGAAAATGCTTCTCTCCGGTCAGAAGTGAGCCGGCTCAGGAGCGAGTACGACCAACTATTCTCTGAGAATGCAGCCCTCAAGAAGAGACTTGGGCAGATACCTGGGAATGACGATCTTAGGTCGGGCCAGAACGATCAGCATGCGGGTAACGACACCCAACAGAGTGGTCAGTCAGAGGCTGTGTAG 1215 0.4634 MGSSDVEKTLKEKESKTPPATSQEQSSTPVTGTVNPDWTNFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMPSPNGIADASGNTPGNIEAEAKPPEVKEKLPIKRSKGSLCSLNMSTGKNNELGKTPATSANGIHSKSGESDSEGTSEGSDENSQNDSQLKSGERQDSFEDEPSQNGSSMHAPQNGVLNTPHTVVNQTMPIVPISAAGPLTAVPGPTTNLNIGMDYWGTPTSSTIPVLRGKVPPAVAGGMVNAGSRDSAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRLRSEYDQLFSENAALKKRLGQIPGNDDLRSGQNDQHAGNDTQQSGQSEAV. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03240 404 MobiDBLite consensus disorder prediction 1 37 - -
Seca11g03240 404 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 398 IPR044827 GO:0003700|GO:0006355|GO:0043565
Seca11g03240 404 MobiDBLite consensus disorder prediction 380 404 - -
Seca11g03240 404 Pfam Disordered region downstream of MFMR 135 272 - -
Seca11g03240 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Seca11g03240 404 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Seca11g03240 404 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Seca11g03240 404 MobiDBLite consensus disorder prediction 145 176 - -
Seca11g03240 404 Coils Coil 324 372 - -
Seca11g03240 404 CDD bZIP_plant_GBF1 309 360 IPR045314 GO:0003700|GO:0006355
Seca11g03240 404 MobiDBLite consensus disorder prediction 184 198 - -
Seca11g03240 404 MobiDBLite consensus disorder prediction 208 227 - -
Seca11g03240 404 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Seca11g03240 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Seca11g03240 404 MobiDBLite consensus disorder prediction 370 404 - -
Seca11g03240 404 MobiDBLite consensus disorder prediction 1 18 - -
Seca11g03240 404 MobiDBLite consensus disorder prediction 305 328 - -
Seca11g03240 404 MobiDBLite consensus disorder prediction 19 37 - -
Seca11g03240 404 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Seca11g03240 404 Gene3D - 307 376 - -
Seca11g03240 404 MobiDBLite consensus disorder prediction 115 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03240 Seca-Chr11 71121376 71127060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03240 1 402 bZIP Transcription Factor Family AT2G35530 61.951 3.60e-166 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca11g03240 MFMR_assoc 3.7e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03240 K09060 - gmx:100101912 661.373