Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03194 ATGTTTACATGCATAGCGTGTACGAAGCAAACTGATGACAGGGACGATGAAGGAGGACCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCCCTGAAGTTTTCAGGTGCTTACAAGCAATGCAAACCCTGCACAGGGTCCAGTAGCTTCAAGAAAGGAAATAGACCATATCCAGACTTTGATACCATCTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACATCCTCTAATTTCCCTGGTGGTAGATCTGACCCAAGATTTACTGGGGGATTTGGTGGTGACCGCACCCCTAGAGGACGTGATTCAGCATCAGTCTGCGATGTAGTGTTAGAGGATGAAGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGAGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTGAAAAGAATTCGCTTCAGGTATGGTAACAACTTGTACTTGACCTCTGGTTTCAGTTACAAGTTTAGTGTTAAAAATTTCCTAATGGTAGATCTTTATGATGGCCACTAA 603 0.4627 MFTCIACTKQTDDRDDEGGPRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSFKKGNRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNFPGGRSDPRFTGGFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFRYGNNLYLTSGFSYKFSVKNFLMVDLYDGH. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03194 200 MobiDBLite consensus disorder prediction 9 23 - -
Seca11g03194 200 MobiDBLite consensus disorder prediction 101 126 - -
Seca11g03194 200 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 171 IPR044532 -
Seca11g03194 200 MobiDBLite consensus disorder prediction 8 31 - -
Seca11g03194 200 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Seca11g03194 200 ProSiteProfiles BRX domain profile. 141 200 IPR013591 -
Seca11g03194 200 Pfam Transcription factor regulating root and shoot growth via Pin3 141 171 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03194 Seca-Chr11 68996703 69000217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03194 1 170 Major Intrinsic Protein MIP AT1G31880 68.786 1.49e-73 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03194 - - gmx:100785003 334.339