Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03193 ATGTTCAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATCGACAAGCTCTTAACACTCCTCCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCACAAGAAAGCCCCATGGCCTCAAACAAGGATTGGACACCGAGGAGTCACTACAAACCCTCTGTGAACAGAGGATTTTACCCCTCTGAACCGTTGGATCACGGTGGTGGCCACCAGTTCCATGCAGGGTCGTCTATGGAGCCATCAAGGTCAACCACCGCTTCTAGGGATGAGCCTTCTATTAGCAATGCCAGTGAAATGGAGTCAGAATGGGTAGAGCAAGATGAGCCTGGAGTTTACATCACAATCAGACAGTTAGCTGATGGGACAAGGGAGCTAAGACGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGTAAATGCAAAAACTTGGTGGGAAGAGAACAGAGAGAGAATACAAGCTCAATACCTTTAA 531 0.4595 MFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEQRDSSYSRLTSAQESPMASNKDWTPRSHYKPSVNRGFYPSEPLDHGGGHQFHAGSSMEPSRSTTASRDEPSISNASEMESEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03193 176 MobiDBLite consensus disorder prediction 96 120 - -
Seca11g03193 176 MobiDBLite consensus disorder prediction 32 125 - -
Seca11g03193 176 MobiDBLite consensus disorder prediction 47 68 - -
Seca11g03193 176 ProSiteProfiles BRX domain profile. 1 23 IPR013591 -
Seca11g03193 176 Pfam Transcription factor regulating root and shoot growth via Pin3 1 22 IPR013591 -
Seca11g03193 176 Pfam Transcription factor regulating root and shoot growth via Pin3 120 175 IPR013591 -
Seca11g03193 176 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 176 IPR044532 -
Seca11g03193 176 ProSiteProfiles BRX domain profile. 121 176 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03193 Seca-Chr11 68994978 68996454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03193 1 176 Major Intrinsic Protein MIP AT1G31880 68.333 9.01e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03193 - - gmx:100785003 337.035