Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03154 ATGCATTGGTTTATCGATTTCTACTTGTTGGATTGCTGCAGACTAGAGTATACAAGAATGGGCAAATGGTTAAGTCTTCTATTTTGCATGCTGCTATTACTAAAGGCAGAAGGGGTTACTGTGCCAATCACTTATGTTCAAAGTGCGGTACCAAAAGGAGCTGTCTGTTTGGATGGGAGCCCACCAGCTTACCACTTCCATAAGGGATTTGGGGCAGGTATTGACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAATAATGTTACTACCTGCCTTGACCGTAGGGAAACTCGTTTAGGTTCATCTAAGAAAATGGATACGCAACTTTCCTTCTCTGGATTTTTTAGTGACAAGCAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTATCGATCCAAAAACCAACTTGCACTTCAGAGGAGGAAGGATTTTTGTTGCTGTCGTTGAGGATTTGCTAGCAAAGGGAATGAAAAATGCTAAAAATGGCTCAGCTAAGAATTTGCCTCCATCCTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCGCAAAATGTGGCAGCACAAATCAGTACACCAATCTTCTTTGTAAATGCGGCCTATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCACTTGGCGTGAGTGCAAGCTTGATATTAAAAACTGCTCTCCTAATCAATTGAGTGTAATGCAAGGTAAACATTTTCTGATCATAACTTGTGTTGCACTGCAATTTGCTGATACCTAA 834 0.4197 MHWFIDFYLLDCCRLEYTRMGKWLSLLFCMLLLLKAEGVTVPITYVQSAVPKGAVCLDGSPPAYHFHKGFGAGIDNWIVHFEGGGWCNNVTTCLDRRETRLGSSKKMDTQLSFSGFFSDKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAIDPKTNLHFRGGRIFVAVVEDLLAKGMKNAKNGSAKNLPPSCTSRLRPGLCFFPQNVAAQISTPIFFVNAAYDSWQIKNILAPGVADPHGTWRECKLDIKNCSPNQLSVMQGKHFLIITCVALQFADT. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03154 277 PANTHER NOTUM-RELATED 29 181 IPR004963 GO:0016787
Seca11g03154 277 Pfam Pectinacetylesterase 182 261 IPR004963 GO:0016787
Seca11g03154 277 Pfam Pectinacetylesterase 35 181 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03154 Seca-Chr11 66873173 66877013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03154 41 270 Carbohydrate Esterase AT1G57590 42.808 4.40e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03154 K19882 - mnt:21404205 339.347