Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03153 ATGAATTGGTTTTCAGGCTTCAGGACTGATTTCTTAAAGGCAATTAGTGTGGTTGGAAACTCTCCATCTAAAGGAATGTTCATAGATGGTTGTTATGCTCACTGCCAAACTGGAATGCAGGAGACATGGTTGAGAAGTGATTCTCCAGTGGTGGCTAAGACTACAATGGCAAAGGCTGTGGGAGATTGGTTTTATGACCGAAGATCTTTCAATGAGGTAGATTGCGCTTACCCTTGCAACCCTACTTGCCATAACCGTGTTTTTGATCAAAACAAGCTTCCAGAAGTTTAG 291 0.4227 MNWFSGFRTDFLKAISVVGNSPSKGMFIDGCYAHCQTGMQETWLRSDSPVVAKTTMAKAVGDWFYDRRSFNEVDCAYPCNPTCHNRVFDQNKLPEV. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03153 96 Pfam Pectinacetylesterase 3 69 IPR004963 GO:0016787
Seca11g03153 96 PANTHER NOTUM-RELATED 2 85 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03153 Seca-Chr11 66872387 66872986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03153 1 88 Carbohydrate Esterase AT5G26670 48.864 3.92e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03153 K19882 - gmx:100781246 174.866