Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03151 ATGGAGTGTGCAAGAATCACCCAATGGCTAAATCTTCTACTATGTGCTTTTCTATTGCTAAAGGCTGAAGGAGATTTTATTCCACTCACCCTTGTTGAGAATGCCGTATCAAAAGGAGCTGTTTGTTTGGATGGCAGTCCCCCAGCTTACCACCTTGATAAGGGATCTGGAGAAGGAAATAACAGCTGGATTGTTCACATTGAGGGAGGAGGATGGTGCGAAAGTGTGACTGCTTGCCTTAACCGTAAGGAAACTTATTTAGGTTCATCTAACCGAATGACTGAGCAACTTGGCTTTTATGGATATCTAAGTAACGATAAACATTTTAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGGGCATCGCTTACTGGTGATGTGGAAAAAGTTGATCCAAAAACCAAGTTATACTTCAGAGGAGCAAGGATTTTTGTTGCTGTAATAGAAGAATTACTAGCGAAAGGAATGAAAAATGCTAAAAATGCTATTCTTTCTGGATGTTCAGCTGGAGGATTGGCTGCTATATTGAACTGTGATCGCTTTAAAGCACTATTACCTGCAGGAACTACAGTAAAATGCGTTTCAGATGCTGGTTATTTTATCAATGTAAAGGATATCTCAGGAGCACAACGTTTTGAAGAGTTCTACAAGAAAGTTGTTGCAACACATGGCTCAGCAAAGCATTTGCCTCCATCCTGCACTTCAAGACTCAGTCCAGGGCAATGCTTTTTCCCCCAAAATATGGCATCAAACATCAGTACACCAATCTTCTTGGTAAATGCAGCCTATGACTCATGGCAGATTAAGAACATCTTGGCACCAGGTGTTGCTGATCCCCACGGCCTTTGGCGTAGCTGCAAGCTTGATATAAAAAACTGCTCACCTGATCAACTAAGTATAATACAAGACTACAGGGTGGAATTCATAAAGGCAGTGAGTGTGATAGGCAAGTCTCCATCTAACGGAATGTTTATAGACTCTTGCTATGCCCACTGCCAAACAGAACCAACACAGACATGGTTCACCAGTGACTCTCCACAGCTTGCCAATAAAACAATTGCCAAGGCTGTAGGAGACTGGTTTTATAAACGAAGTCCTTTCCGAAAGATAGATTGCTCTTACCCTTGCAACCCTACTTGCTATGGCCATACTTTTGATAATTTTGAACCATAA 1191 0.4131 MECARITQWLNLLLCAFLLLKAEGDFIPLTLVENAVSKGAVCLDGSPPAYHLDKGSGEGNNSWIVHIEGGGWCESVTACLNRKETYLGSSNRMTEQLGFYGYLSNDKHFNPDFYNWNRVKIRYCDGASLTGDVEKVDPKTKLYFRGARIFVAVIEELLAKGMKNAKNAILSGCSAGGLAAILNCDRFKALLPAGTTVKCVSDAGYFINVKDISGAQRFEEFYKKVVATHGSAKHLPPSCTSRLSPGQCFFPQNMASNISTPIFLVNAAYDSWQIKNILAPGVADPHGLWRSCKLDIKNCSPDQLSIIQDYRVEFIKAVSVIGKSPSNGMFIDSCYAHCQTEPTQTWFTSDSPQLANKTIAKAVGDWFYKRSPFRKIDCSYPCNPTCYGHTFDNFEP. 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03151 396 PANTHER NOTUM-RELATED 14 387 IPR004963 GO:0016787
Seca11g03151 396 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Seca11g03151 396 SUPERFAMILY alpha/beta-Hydrolases 56 272 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03151 Seca-Chr11 66837947 66843002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03151 5 391 Carbohydrate Esterase AT4G19420 58.531 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03151 K19882 - gmx:100781246 602.823