Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03134 ATGGAGTCAAATAATGAAATTCAGCCATTCATGACAATGCCTAGAATGGAAGATTTCATAGACTTTCAAATAGAGACTCAAGATTCCTCTTCACTCAACCAGATGTATAATCATGGGTTTATCCCTATCCATTTCAACAACCAACAAGATCTGCAAACTACCAACTCGGGCTTTGAGTTGGATGACTCGGTCTTTAACACCAAAACTCATATTGCTACTCCTGCGGAATTGGGAAATGTGTCTTATGATGATCAGTTTGTTGTTATGGTGGAATCTGATGCCTCAAAGAAAATTACACACACTGTTGGCAAAAGGACTTCTATTTACAGACGAGTTACAAGAGGAATCAATGGACAGGTTTCCAATTATGCAAAGGAATTGGAGGAGATGGAAAATGTAGGAAAGCAGGAATATATTACATCATTGAGAAGAATAGCAGTGCCTTTTCAAGGGGAGTTTCCATATATAGAGGTGTTTCAAGACAATGAAGAGGAAGCGGCAGAGGCATATGACATTGCGGCCATCAAGTTTAGAGGTGCAAACACCGTAACCAATTTTGAGATAAGTAGATATGATGTGGAAGCTATATCGAGTAGTACTCTTCTGGTTGGTGGGGCAACAAAAAAGATGAGGTTTTCTAAAGAATTAGAGAAGATAGCTCCTATGACTAGTGGTCATGAAACTCATAGCTCAAATGTGAATAGTACCATCGATATCCCAACCATTCAGCCACTTGCTGCTATACCAAATGATCCCATAACAACATTTTATCAGCCAAACCCCTACACCAATTTCATCCTACCAATGATGGAAGTGGCACAATAG 825 0.3939 MESNNEIQPFMTMPRMEDFIDFQIETQDSSSLNQMYNHGFIPIHFNNQQDLQTTNSGFELDDSVFNTKTHIATPAELGNVSYDDQFVVMVESDASKKITHTVGKRTSIYRRVTRGINGQVSNYAKELEEMENVGKQEYITSLRRIAVPFQGEFPYIEVFQDNEEEAAEAYDIAAIKFRGANTVTNFEISRYDVEAISSSTLLVGGATKKMRFSKELEKIAPMTSGHETHSSNVNSTIDIPTIQPLAAIPNDPITTFYQPNPYTNFILPMMEVAQ. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03134 274 ProSiteProfiles AP2/ERF domain profile. 108 187 IPR001471 GO:0003700|GO:0006355
Seca11g03134 274 SUPERFAMILY DNA-binding domain 161 189 IPR016177 GO:0003677
Seca11g03134 274 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 161 215 - -
Seca11g03134 274 SMART rav1_2 108 193 IPR001471 GO:0003700|GO:0006355
Seca11g03134 274 Gene3D AP2/ERF domain 109 189 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03134 Seca-Chr11 66137469 66141051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03134 120 217 AP2-EREBP Transcription Factor Family AT1G51190 43.307 1.16e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03134 K09285 - gmx:100795280 119.398