Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03116 ATGGAAGTCACCACCAACACTTTGTTCTGTTTGTTTGCTTCTTTTCTCTTCATTGTTCTGTTCAAATCACTCATCAAATCCTTCTCCTTCTCCTCCAAAAGGAGACAATTGCCACTCCCTCCTGGTTCCATGGGTTGGCCTTACATAGGTGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCAACAAAATCAAGAGGTATGGCTCTATGTTCAAGTCCCATATTTTGGGTTGTCCTTGTGTGATGATTTCTAGCCCAGAAGCAGCTAAATTTGTGTTGAACAAAGCTCAACTTTTCAAACCAACATTTCCTGCTAGCAAGGAAAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACCAAGGAGCATACCATGCTAACCTAAGGAGGCTTGTCCTTCGTACCTTCACGCCTCAGGCCATACAAAAAATTGTCCCTGACATTGAATCCATTGCCCTAAGTTGCCTCAAATCATGGGAAGGAAAATTGATCACCACTTTCCTTGAAATGAAAAATTTCACCTTCAATGTTGCCCTGCTTTCAATTTTTGGGAAAGATGAAATTCTATACAGAGAGGACCTGAAACGATGCTACTACACACTTGAGAAAGGGTACAACTCAATGCCCATAAACCTTCCAGGGACACTGTTCCACAAGGCTATGAAGGCAAGGAAAGAGCTTGCTCAGATCTTGGCACAAATCATCTCAAAAAGGAGGAATATGGAGCAAGAGTACAATGACTTGTTGGGTTCTTTCATGGGTGAGAAAGCAGGTCTCACTGATGAACAGATAGCAGATAACATAATTGGTGTCATATTTGCTGCTCGTGACACCACTGCTAGTGTACTTACGTGGATTGTCAAGTACCTTGGTGAAAACCCAAGTGTCCTAGAAGCAGTTACAGAAGAGCAAGAGTCTATACTAAAGAGCAAGCAAGAAAGTGGTGAAGAAATGGGTCTAACTTGGGCAGACACAAAAAATATGCCATTAACTTCAAGGGTCATACAAGAGACTCTAAGAGTTGCATCAATTTTGTCTTTTACTTTCAGAGAAGCCATAGAGGATGTTGAATATGAAGGGTATCTTATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGAAATATTCACCACAGTCCAGATAACTTCAAAGAGCCAGAGAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAAACCCAATACCTTCATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCCAAGTTGGAGATTTTGGTGCTTGTACATCATCTGACCACAAAGTACAGGTTGGTAAACTTGATTATTATTATTATCAATTATCATTGCAAGCCTTTTTCAGTGGAGACATATTCCAAAATTATATATCATATGTTTTTAGAATGA 1410 0.4014 MEVTTNTLFCLFASFLFIVLFKSLIKSFSFSSKRRQLPLPPGSMGWPYIGETFQMYSQDPNVFFANKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGAYHANLRRLVLRTFTPQAIQKIVPDIESIALSCLKSWEGKLITTFLEMKNFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAQILAQIISKRRNMEQEYNDLLGSFMGEKAGLTDEQIADNIIGVIFAARDTTASVLTWIVKYLGENPSVLEAVTEEQESILKSKQESGEEMGLTWADTKNMPLTSRVIQETLRVASILSFTFREAIEDVEYEGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLVHHLTTKYRLVNLIIIIINYHCKPFSVETYSKIIYHMFLE. 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03116 469 FunFam Abscisic acid 8 29 462 - -
Seca11g03116 469 SUPERFAMILY Cytochrome P450 34 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 Pfam Cytochrome P450 40 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 CDD CYP90-like 68 438 - -
Seca11g03116 469 Gene3D Cytochrome P450 29 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Seca11g03116 469 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca11g03116 469 PANTHER CYTOCHROME P450 26 35 439 - -
Seca11g03116 469 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03116 Seca-Chr11 64309463 64312514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03116 11 443 Cytochrome P450 AT4G19230 76.959 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03116 K09843 - gmx:100170674 760.755