Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g03115 ATGGTTTTTGATTCGAAGAATAATATTCAATTTGTTGATGGAACTCTTACAAAGCCAAGTAATGGTGATCCGGCAACAGCCAAAATTTTGAAAGATTTATATGATAGATATTATCAAGGTGATAAATTTAGAAATTCTGAGTTGCAAGAAGAATTGTATGCATTTGAGCTAGGAGATCGTAGAATCTCATCTTATTATACACAGGCCAATGGGGAAGGTTCATGGAGATCATTGCCCAAGAATGCAGGATTATTAAGGTATGGAAAGAGTTACATAAGATGGATTAGCTATTTAAGAGCTGACCTCAAAAGAGGGAACATTAAAGCTACACGCTTCTTTTGGCAACAGTGTGATGCAGAGCAGAACTTTGAGTTCGGATTGGGGATTTCTGATTTGGGGGAAAGTGAATTTTTTAACACGATTGGATGTAGTTGTGATCTAGTTCCAACTATAACATCATACAGTGAGAATGATTATGTCATTAGGTTCTTGAAGGGATTGAATGACGATTACTTCGTTGTTGGAGCGCTGGAGCACGAGATTCTAATTTCCAATGGGCCAAAGCAAGGATTGGATCATGAAGATCCACATACTCATCTTTCTACCTTCTATGAATTGATTGGTACTATGGGTTTTGAGGAAGGTGATTGGGAATCTGTCTATTTACGATTGTTTCCTTTTTCTTTAACAGGTAAGGCAAAGGAGTGGCTGAAATCACATCCCAATCAAAGTCTGACCAGTTGGAGCGTAGTGGAAGACAAGTTCCTGAAAAGATTCTTTCCACCATCACGCTACATTCAAGCGAAGTCAGACATCTCCACATTCAGGCAAGGAGAAGACGAACCATTATGTGAAGCCTGGGAGAGATTCAAGTCCTTGCTGCAAAAGTGTCCAAACCATGGTTTTGAAGACATTGCTCAACTGAACATCTTTTGCAATGGACTCAGACTCGAGTCAAAGTCATTCATAGATGCTGCAACAGGAGGAACAATTATAACAATAGATGCAGAGCGTGATATTGCAATAACTGATAATTTTACACAGAATGACCAAGAAGCTCAATATGGGAGACAACCAGTCCAGAAGAAGGGGATACTAGAGCTAAATAGCAATGATGCACTTTTAGCAGAAAATATACTCATCAAGCGACAGCTAGAGGCACTTACCAAGAAAATGGATACACTCCCTCAACAATTGCAAGCAGTGCAAGCAATGCAATCTCAACCCAGCCAAACACCACAATTGATTTGTGATTTTTGCGGAGGCGACCATCCCAATGGTCATTGGTCCTATCAGGATACTGAAACAGAACAGGTCAGCTATATGGGAAATCAAGGAATGCAAGGTAATTTCTCCAACAAAAATCAATATTCACAGGGATGGAGAAATAATCAAAACAACAATTCTGGCTGGAGACAAGATGGAGGCAATAGGCAAATGTATTATCAGCAGCAGCAACAACAAAGTTATCCTTCAGTGCATGATAAGCTCGCAAAAATGGATGAGAAAATTGATGCTCTCGTGCAATCTATTGAAGGCTATAAAAAGACTATAGATGCAGCCATCGGACTTTTGGAGACTCAAGTTGGCCAATTAGCAAAAGATATGGAAGAGCACAATAGAAGCCAATTTACAGCAAACACTCAAATTAACCCTAAGGAGCAATGCAATGCAGTTACTACTGAAGGTAATACATCAGAAGAGAGTGATCTAGAGGACAACATAACATCTAAAGAAAAGTTGCTCACAAAAGAGATTGTGCAAAGGAGTGTTCAATTAATAGAGAATCCAGAAGTAGTTCTAAAAGAAGCAGAAGAGTCAGAAAGGGTCTACATCTTAGAAAAATCATTAGACCCAGGCAAATTCATAGTACCAGTTACTGTTGGTACTCAACGAGTCACAAAAGCCTTGCTAGATCTTGGGGCAAGCATCAATCTGGTGTCGCTATCATTTTTCAAACGATTGGGAATTTTGAAGGTCAAACCTGCAAATGTAGCTCTACAGCTTGCAAACAAGTCCACACAACATCCATATGGAATAATTGAAGATGTTCCTGTAAGGGTGGACAAGTTTGTGTATGTTGTAGACTTCTTTATTGCTGAAATGGAAGAGGATACTGATGTCCCCTTAATCTTAGGAAGACCATTCATGAAATCTGCCAAGATGATAGTTGATGTTGATCGGGGAAAACTTCAACTCAGCTCTCAAGATGAGAGTATAATTTTCCATTTGGACAGAGGGATTCCCCACCAAGATGAACCACCAGATCGATTGGAATTAGATCCTACTGGTGGGATCTATATCACTCATTCTGAACCAAAGCTGCAAAAAGTAAGAATAAAGGAAGTCATGAATCACAGTTCTTCTAAACACAAGAAGATGAAGGTTCCCAATATTCTGAGGAAACCAACAAGAAGAAAGAAGCAGCTGCAGGAATCTATGGTGGAGTTCCGGTTCAAAAAGAGAAAAAGATCAACATCAGATGAGGAAGAAGATAGTGAGGAAATTGATGACAAGTCAAGAAGCTGGTATGGAGGATGGCTCAAGGCAACAAGAGGTGGATCAACTGATTCTACCATCATCCTCCAGTTGAAACCACCTTGA 2604 0.3963 MVFDSKNNIQFVDGTLTKPSNGDPATAKILKDLYDRYYQGDKFRNSELQEELYAFELGDRRISSYYTQANGEGSWRSLPKNAGLLRYGKSYIRWISYLRADLKRGNIKATRFFWQQCDAEQNFEFGLGISDLGESEFFNTIGCSCDLVPTITSYSENDYVIRFLKGLNDDYFVVGALEHEILISNGPKQGLDHEDPHTHLSTFYELIGTMGFEEGDWESVYLRLFPFSLTGKAKEWLKSHPNQSLTSWSVVEDKFLKRFFPPSRYIQAKSDISTFRQGEDEPLCEAWERFKSLLQKCPNHGFEDIAQLNIFCNGLRLESKSFIDAATGGTIITIDAERDIAITDNFTQNDQEAQYGRQPVQKKGILELNSNDALLAENILIKRQLEALTKKMDTLPQQLQAVQAMQSQPSQTPQLICDFCGGDHPNGHWSYQDTETEQVSYMGNQGMQGNFSNKNQYSQGWRNNQNNNSGWRQDGGNRQMYYQQQQQQSYPSVHDKLAKMDEKIDALVQSIEGYKKTIDAAIGLLETQVGQLAKDMEEHNRSQFTANTQINPKEQCNAVTTEGNTSEESDLEDNITSKEKLLTKEIVQRSVQLIENPEVVLKEAEESERVYILEKSLDPGKFIVPVTVGTQRVTKALLDLGASINLVSLSFFKRLGILKVKPANVALQLANKSTQHPYGIIEDVPVRVDKFVYVVDFFIAEMEEDTDVPLILGRPFMKSAKMIVDVDRGKLQLSSQDESIIFHLDRGIPHQDEPPDRLELDPTGGIYITHSEPKLQKVRIKEVMNHSSSKHKKMKVPNILRKPTRRKKQLQESMVEFRFKKRKRSTSDEEEDSEEIDDKSRSWYGGWLKATRGGSTDSTIILQLKPP. 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g03115 867 Coils Coil 497 517 - -
Seca11g03115 867 Gene3D Acid Proteases 602 746 IPR021109 -
Seca11g03115 867 MobiDBLite consensus disorder prediction 816 839 - -
Seca11g03115 867 Coils Coil 371 391 - -
Seca11g03115 867 Pfam Retrotransposon gag protein 224 316 IPR005162 -
Seca11g03115 867 SUPERFAMILY Acid proteases 620 725 IPR021109 -
Seca11g03115 867 CDD retropepsin_like 624 718 - -
Seca11g03115 867 PANTHER - 545 818 - -
Seca11g03115 867 Pfam Aspartyl protease 624 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g03115 Seca-Chr11 64271336 64279268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g03115 61 107 MYB Transcription Factor Family AT2G47460 75.000 1.36e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g03115 - - var:108327048 606.675